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. 2021 Mar 1;12(1):855–874. doi: 10.1080/21655979.2021.1890399

Table 3.

Top 10 significant Kyoto Encyclopedia of Genes and Genome pathways of SYNJ2 and differentially coexpressed genes

Term Count Genes Fold Enrichment P-value FDR
Metabolic pathways 59 HEXA, HEXB, IL4I1, GLDC, ASPA, TDO2, SCLY, MAT1A, CYP7A1, HDC, GSTZ1, SYNJ2, HPD, AADAT, HMGCLL1, CYP1A1, ACADS, HAL, ALDH3B2, CYP26A1, ACADL, TAT, GLUL, CTH, SDS, AKR1B10, HAO2, UROC1, AKR1D1, OAT, PRODH, BCAT1, FUT5, AASS, KMO, GLS2, ARG1, MTHFS, CSAD, ADH4, HK3, ALDH4A1, ENO3, CDA, FUT2, INPP5B, BCKDHA, NOS1, AMACR, FTCD, ACACB, DBH, PCK1, CEL, AMDHD1, GCK, AGXT2, CYP4F2, CBS 4.8963 6.60E-35 7.41E-32
Biosynthesis of antibiotics 17 AADAT, BCAT1, BCKDHA, AASS, TAT, PCK1, GLDC, ARG1, CTH, GCK, SDS, HK3, HAO2, ENO3, OAT, CBS, PRODH 8.1120 1.05E-10 1.19E-07
Histidine metabolism 7 AMDHD1, ASPA, HDC, FTCD, HAL, ALDH3B2, UROC1 32.1878 4.49E-08 5.04E-05
Biosynthesis of amino acids 9 BCAT1, ARG1, GLUL, CTH, MAT1A, SDS, ENO3, TAT, CBS 12.6452 3.86E-07 4.34E-04
Tyrosine metabolism 7 ADH4, GSTZ1, ALDH3B2, IL4I1, DBH, TAT, HPD 20.2324 8.84E-07 9.94E-04
Primary bile acid biosynthesis 5 CYP39A1, CYP46A1, CYP7A1, AMACR, AKR1D1 29.7535 1.78E-05 0.0200
Alanine, aspartate and glutamate metabolism 6 GLS2, GLUL, ASPA, ALDH4A1, IL4I1, AGXT2 17.3420 1.95E-05 0.0219
Cysteine and methionine metabolism 6 CTH, MAT1A, SDS, IL4I1, TAT, CBS 15.9729 2.95E-05 0.0332
Glycolysis/Gluconeogenesis 6 GCK, ADH4, HK3, ENO3, ALDH3B2, PCK1 9.0593 4.56E-04 0.5119
Glycine, serine and threonine metabolism 5 CTH, SDS, AGXT2, CBS, GLDC 12.9695 5.23E-04 0.5865

FDR: false discovery rate.