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Transcriptional behavior of clonal HIV-1 proviruses
Phylogenetic trees of clonal HIV-1 proviruses from the six study participants. Each symbol reflects one single provirus. Proviral sequence calls and host genes harboring IS are indicated. Clones that are transcriptionally silent across all members are boxed. PSC, premature stop codon; large del, large deletion; hypermut, hypermutation.
