TABLE 1.
Human E. hellem isolates used in this study and genotyping results from analyses of ITS, SSU rRNA, and PTP genes
Isolate | Origina | Sex/age (yr)b | Isolation (mo/yr) | Country/state | ITS genotypec | SSU rRNA genotyped | PTP genotype | Reference(s) |
---|---|---|---|---|---|---|---|---|
CDC:V278 | Urine | M | 11/92 | Puerto Rico | 1A | 1A | 1A | 37 |
CDC:V242 | Urine | M/26* | 01/92 | USA/Ga. | 1A | 1A | 1A | 31, 37 |
CDC:V274 | BAL | M/26* | 10/92 | USA/Ga. | 1A | 1A | 1A | 31, 37 |
Le | Conjunctiva | M/46 | 12/89 | USA/N.Y. | 1A | 1A | 1A | 7, 13 |
CDC:V257 | Urine | F/35† | 06/92 | USA/N.Y. | 1A | 1A | 1A | 31, 37 |
CDC:V258 | Sputum | F/35† | 06/92 | USA/N.Y. | 1A | 1A | 1A | 31, 37 |
CDC:V281 | Nasal | F/35† | 12/92 | USA/N.Y. | 1A | 1A | 1A | 31, 37 |
Wo | Conjunctiva | M/37 | 1994 | USA/Mass. | 1A | 1A | 1A | 7, 9 |
Ye | Cornea | M/29 | 12/89 | USA/Tex. | 1A | 1A | 1A | 7, 40 |
Ly | Cornea | M/30 | 1990 | USA/Ohio | 1A | 1A | 1A | Unpublished data |
He | Conjunctiva | M/33 | 12/89 | USA/N.Y. | 1A | 1A | 1B | 7, 13 |
CDC:V213 | Urine | M/30 | 02/91 | USA/Ga. | 1A | 1A | 1B | 31, 37 |
CDC:SP-1 | BAL | M/41 | 1996 | Spain | 1A | 1A | 1B | 22 |
LEPV-2-93 | BAL | M/27 | 10/93 | Italy | 1A | 1A | 1B | 30, 37 |
PV-3-93 | BAL | M/30 | 12/93 | Italy | 1A | 1A | 1B | 29, 37 |
PV-8-95 | Sputum | F/34 | 03/95 | Italy | 1A | 1C | 1C | 14, 37 |
VRPV-1-93 | Urine | M/33 | 09/93 | Italy | 1A | 1C | 1C | 14, 37 |
PV-5-95 | BAL | M/38 | 01/95 | Italy | 1A | 1C | 1C | 29, 37 |
PV-11-98 | Nasal | M/34 | 01/98 | Italy | 1A | 1C | 1C | 14, 37 |
PV-10-97 | Ocular | M/12● | 01/97 | Italy | 1A | 1C | 1C | 14, 37 |
PV-10-97EI | Sputum | M/12● | 01/97 | Italy | 1A | 1C | 1C | 14, 37 |
MIPV-6-95 | BAL | F/33 | 10/95 | Italy | 1A | 1C | 1C | 14, 37 |
PV-9-96 | BAL | M/38e | 07/96 | Italy | 1A | 1C | 1C | 28 |
CDC:V261 | Urine | M/49 | 06/92 | Switzerland | 2B | 2B | 2B | 37, 38 |
BAL, bronchoalveolar lavage.
Superscript symbols indicate multiple samples from the same patient with the same symbol.
Genotypes 1A, 1B, and 1C had an identical ITS sequence.
Genotypes 1A and 1B had an identical SSU rRNA sequence.
HIV negative.