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. 2022 Jan 5;54(1):12–22. doi: 10.1038/s12276-021-00718-4

Fig. 3. Gene set enrichment analysis for target genes of promoter differentially methylated regions (pDMRs) and enhancer differentially methylated regions (eDMRs).

Fig. 3

a Enrichment of cancer hallmark gene sets from the CancerSEA database for functional (F)-eDMR target genes. The dashed line indicates the significance threshold (q-value < 0.05). b Enrichment of each category of cancer-associated genes from the CancerMine database for F-pDMR and F-eDMR target genes. The dashed line indicates the significance threshold (q-value < 0.05). c Enrichment of Reactome pathway gene sets for F-pDMR and F-eDMR target genes. The bar graph indicates the number of significantly enriched pathways (q-value < 0.01) for each category. d Enrichment of cancer-testis genes for F-pDMR and F-eDMR target genes.