Table 1. Refinement and model statistics for structures of ABCA1 and ABCA4.
| Human ABCA1 | Human ABCA1 (refined) | Human ABCA4 | |
|---|---|---|---|
| PDB 5XJY | PDB 7ROQ | PDB 7LKP | |
| CC (mask) | 0.76 | 0.71 | 0.74 |
| CC (volume) | 0.74 | 0.69 | 0.74 |
| CC (peaks) | 0.52 | 0.47 | 0.53 |
| Mean CC for ligands | 0.70 | 0.62 | 0.63 |
| Clashscore, all atomsa | 9.20 | 11.8 | 19.9 |
| Rotamer outliersa | 1.27% | 0% | 0.60% |
| Ramachandran outliersa | 0.16% | 0.00% | 0.05% |
| Ramachandran favoreda | 85.8% | 93.6% | 94.3% |
| Rama-Z, whole (RMSD) | -6.01 (0.13) | -0.58 (0.20) | -0.89 (0.19) |
| Rama-Z, helix (RMSD) | -3.43 (0.11) | 1.30 (0.18) | 0.84 (0.16) |
| Rama-Z, sheet (RMSD) | -5.20 (0.28) | -1.24 (0.47) | -1.90 (0.39) |
| Cβ deviationsa | 0% | 0% | 0% |
| MolProbity scorea,b | 2.21 | 2.07 | 2.18 |
ahttp://molprobity.biochem.duke.edu (using electron-cloud x-H bond-lengths and no N/Q/H flips).
bMolProbity score combines the clashscore, rotamer, and Ramachandran evaluations into a single value.