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. 2022 Feb 4;12:1940. doi: 10.1038/s41598-022-05850-3

Figure 1.

Figure 1

Genome and proteome comparison of L. plantarum DKL2 and JGR2 with the reference strains. (a) Core genome-based phylogeny performed by neighbour-joining method and illustrated using iTOL (v6, https://itol.embl.de/). Only the bootstrap values < 100% are shown in figure. (b) Proteome comparison using PATRIC (v 3.6.12, https://www.patricbrc.org/) showing the genomic regions (V1-V4) encoding the variable proteins. List of tracks, from outside to inside: L. plantarum WCFS1, ST-III, JDM1, P-8, 16, ZJ316, DSM 20174, DKL3, and JGR2.