TABLE 1.
Oligonucleotide primer sequences used for PCR
Primer | Specificity | Sequence(5′-3′) | G+C content (%) |
---|---|---|---|
Eco 223 | E. coli | ATC AAC CGA GAT TCC CCC AGT | 52 |
Eco 455 | E. coli | TCA CTA TCG GTC AGT CAG GAG | 52 |
Eco 2083 | E. coli | GCT TGA CAC TGA ACA TTG AG | 45 |
Eco 2745 | E. coli | GCA CTT ATC TCT TCC GCA TT | 45 |
Sau 234 | S. aureus | CGA TTC CCT TAG TAG CGG CG | 60 |
Sau 1501 | S. aureus | CCA ATC GCA CGC TTC GCC TA | 60 |
Sau 327 | S. aureus | GGA CGA CAT TAG ACG AAT CA | 45 |
Sau 1645 | S. aureus | CGG GCA CCT ATT TTC TAT CT | 45 |
Sag 40 | S. agalactiae | CGC TGA GGT TTG GTG TTT ACA | 48 |
Sag 445 | S. agalactiae | CAC TCC TAC CAA CGT TCT TC | 50 |
Sag 432 | S. agalactiae | CGT TGG TAG GAG TGG AAA AT | 45 |
Sag 1018 | S. agalactiae | CTG CTC CGA AGA GAA AGC CT | 55 |
Sdy 105 | S. dysgalactiae | AAA GGT GCA ACT GCA TCA CTA | 43 |
Sdy 386 | S. dysgalactiae | GTC ACA TGG TGG ATT TTC CA | 45 |
Sdy 519 | S. dysgalactiae | GGC TCA ACC ACT NTA CGC TT | 50 |
Sdy 920 | S. dysgalactiae | ATC TCT AGA CCG GTC AGG AG | 55 |
Spa 301 | S. parauberis | GCG ACG TGG GAT CAA ATA CT | 50 |
Spa 1219 | S. parauberis | TAC CAT TAC CTC TAA AGG TA | 35 |
Spa 2152 | S. parauberis | TTT CGT CTG AGG CAA TGT TG | 45 |
Spa 2870 | S. parauberis | GCT TCA TAT ATC GCT ATA CT | 35 |
Sub 302 | S. uberis | CGA AGT GGG ACA TAA AGT TA | 40 |
Sub 396 | S. uberis | CTG CTA GGG CTA AAG TCA AT | 45 |
Sub 1546 | S. uberis | TGA TGG GGA GCG AAA ATA AG | 45 |
Sub 2170 | S. uberis | CCC AAC AAC GCC TCA AAC GA | 55 |
Uni 678 | Universal | AGT GGA ATT CCA TGT GTA GC | 45 |
Uni 888 | Universal | GAG TGC TTA ATG CGT TAG CT | 45 |
Uni 1870 | Universal | TGG AAG GTT AAG AGG AGT GG | 50 |
Uni 2308 | Universal | GCC TCC GTT ACC TTT TAG GA | 50 |