Table 2.
Relative abundance data of species detected by 16S rRNA gene amplicon sequencing
| Shared species | Other species | L. pentosus | L. sunkii | |||
|---|---|---|---|---|---|---|
| [%] | [n] | [%] | [n] | [%] | [%] | |
| S01 | 98.73 | 13 | 0.03 | 3 | 1.24 | 0.01 |
| S02 | 95.06 | 12 | 0.09 | 6 | 4.83 | 0.02 |
| S03 | 91.16 | 14 | 0.36 | 6 | 8.47 | |
| S04 | 44.69 | 14 | 0.44 | 11 | 36.27 | 18.6 |
| S05 | 90.24 | 13 | 0.07 | 4 | 6.33 | 3.36 |
| S06 | 98.62 | 12 | 0.01 | 5 | 1.37 | |
| S07 | 92.47 | 12 | 0.01 | 1 | 7.52 | |
| S08 | 99.93 | 10 | 0.02 | 3 | 0.05 | |
| S09 | 98.89 | 12 | 0.11 | 3 | 1.00 | |
| S10 | 99.91 | 7 | 0.09 | 1 | ||
| S11 | 94.59 | 15 | 0.05 | 3 | 5.36 | |
| S12 | 99.31 | 13 | 0.09 | 5 | 0.33 | 0.27 |
| S13 | 94.06 | 12 | 0.14 | 4 | 5.81 | |
| S14 | 94.76 | 13 | 0.23 | 5 | 5.01 | |
| S15 | 99.26 | 10 | 0.03 | 5 | 0.71 | |
| S16 | 98.11 | 11 | 0.02 | 4 | 1.86 | |
| S17 | 89.88 | 11 | 0.04 | 2 | 10.08 | |
| S18 | 99.5 | 11 | 0.18 | 3 | 0.31 | |
| S19 | 95.44 | 14 | 0.13 | 6 | 4.43 | |
| S20 | 98.24 | 10 | 0.63 | 5 | 1.12 | 0.01 |
| S21 | 97.85 | 13 | 0.03 | 7 | 2.11 | |
Percentage of reads assigned to species also covered by HT-qPCR (shared) and other species that were not covered by HT-qPCR. The two species, Lactiplantibacillus pentosus and Lentilactobacillus sunkii, with the largest overall abundance are shown separately