Table 2. Primers used to detect virulence gene in Salmonella isolates.
PCR | Target Gene | Sequence | Amplicon size (bp) | Thermal Profile | References |
---|---|---|---|---|---|
P-1 | agfA | F-TCCACAATGGGGCGGCGGCG | 350 | 94°C for 1 sec; 58°C for 1 sec; 74°C 21 sec | [59] |
R-CCTGACGCACCATTACGCTG | |||||
P-2 | IpfA | F-CTTTCGCTGCTGAATCTGGT | 250 | 94°C for 1 sec; 55°C for 1 sec; 74°C 21 sec | [37] |
R-CAGTGTTAACAGAAACCAGT | |||||
P-3 | hilA | F-CTGCCGCAGTGTTAAGGATA | 497 | 94°C for 120 sec; 62°C for 1 min; 72°C 1 min | [60] |
R-CTGTCGCCTTAATCGCATGT | |||||
P-4 | sivH | F-GTATGCGAACAAGCGTAACAC | 763 | 94°C for 30 sec; 56°C for 45 sec; 72°C 45 sec | [61] |
R-CAGAATGCGAATCCTTCGCAC | |||||
P-5 | sefA | F-GATACTGCTGAACGTAGAAGG | 488 | 94°C for 1 sec; 56°C for 1 sec; 74°C 21 sec | [62] |
R-GCGTAAATCAGCATCTGCAGTAGC | |||||
P-6 | sopE | F-GGATGCCTTCTGATGTTGACTGG | 398 | 94°C for 1 min; 55°C for 1 min; 72°C for 1 min | [63] |
R-ACACACTTTCACCGAGGAAGCG | |||||
P-7 | spvC | F-CCCAAACCCATACTTACTCTG | 669 | 93°C for 1 min; 42°C for 1 min; 72°C for 2 min | [64] |
R-CGGAAATACCATCTACAAATA |