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. 2021 Mar 8;17:1744806921999924. doi: 10.1177/1744806921999924

Table 3.

Top 20 candidate SNPs selected from GWAS for patients with postherpetic neuralgia (PHN).

Model Rank CHR SNP Position P Related gene Genotype (patients)
Genotype (controls)
A/A A/B B/B A/A A/B B/B
Trend 1 13 rs4773840 94568426 0.0000001638* ABCC4 16 40 33 10 96 176
Trend 2 13 rs1678353 94547567 0.000000255 ABCC4 17 39 33 9 103 170
Trend 3 13 rs1751057 94548737 0.0000003913 ABCC4 17 39 33 10 102 170
Trend 4 13 rs1678395 94563955 0.000001063 ABCC4 16 40 33 11 101 170
Trend 5 13 rs1678362 94529692 0.000001482 ABCC4 16 41 32 12 103 167
Trend 5 13 rs1751052 94531379 0.000001482 ABCC4 16 41 32 12 103 167
Trend 5 13 rs1189438 94532991 0.000001482 ABCC4 16 41 32 12 103 167
Trend 8 9 rs10114508 26892593 0.000002803 5 36 46 2 63 214
Trend 9 13 rs1729752 94530363 0.000004509 ABCC4 18 39 32 14 108 160
Trend 10 13 rs4148540 94491368 0.000005799 ABCC4 13 45 31 16 94 172
Trend 10 13 rs4148540 94491368 0.000005799 ABCC4 4 42 43 66 136 80
Trend 12 18 rs12458523 19074726 0.00000617 CABLES1 11 43 35 14 82 186
Trend 13 14 rs2167151 78933086 0.000006287 NRXN3 6 44 39 6 80 196
Trend 14 12 rs10851014 117614600 0.0000063 16 39 34 12 105 165
Trend 15 13 rs1678387 94515907 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs1678365 94516981 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs1189451 94520087 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs2619312 94521040 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs1751037 94521559 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs1189461 94521789 0.000009474 ABCC4 16 39 34 12 105 165
Trend 15 13 rs1189464 94523867 0.000009474 ABCC4 16 39 34 12 105 165
Dominant 1 6 rs4075048 19275975 0.00001134 0 4 85 4 65 213
Dominant 2 14 rs2167151 78933086 0.00001212 NRXN3 11 43 35 14 82 186
Dominant 3 2 rs6718476 6112647 0.00001274 11 38 40 59 166 57
Dominant 3 2 rs2693818 6121959 0.00001274 11 38 40 59 166 57
Dominant 5 13 rs4148540 94491368 0.00001754 ABCC4 13 45 31 16 94 172
Dominant 6 6 rs9368038 19298240 0.00001905 0 5 84 5 66 211
Dominant 6 6 rs9350106 19303045 0.00001905 0 5 84 5 66 211
Dominant 8 12 rs10851014 117614600 0.00002548 6 44 39 6 80 196
Dominant 9 2 rs4675047 226665422 0.00002799 3 24 62 29 125 119
Dominant 10 1 rs2176360 188083580 0.00002889 9 50 30 14 100 168
Dominant 11 7 rs4722067 21868091 0.00003014 DNAH11 16 33 40 82 140 60
Dominant 12 16 rs12596324 26039779 0.00003039 HS3ST4 10 29 50 44 150 88
Dominant 13 6 rs9358193 19281466 0.0000309 0 5 84 5 64 211
Dominant 14 6 rs648248 117187750 0.00003254 FAM162B 13 30 46 48 157 77
Dominant 15 9 rs10114508 26892593 0.00003959 5 36 46 2 63 214
Dominant 16 13 rs4773840 94568426 0.00004453 ABCC4 16 40 33 10 96 176
Dominant 17 8 rs7822451 17266781 0.00004517 MTMR7 5 29 55 35 143 104
Dominant 18 7 rs10278297 135341940 0.00004885 15 33 41 49 168 65
Dominant 19 1 rs624912 236807876 0.00005329 7 21 61 32 126 123
Dominant 20 8 rs2658914 56511974 0.00005364 XKR4 0 18 71 13 111 158
Recessive 1 13 rs1678353 94547567 0.00000369 ABCC4 17 39 33 9 103 170
Recessive 2 13 rs1751057 94548737 0.000008018 ABCC4 17 39 33 10 102 170
Recessive 3 18 rs12458523 19074726 0.00001884 CABLES1 4 42 43 66 136 80
Recessive 4 13 rs4773840 94568426 0.00002414 ABCC4 16 40 33 10 96 176
Recessive 5 12 rs10849659 118331044 0.00002555 CCDC60 19 28 42 15 132 135
Recessive 6 13 rs1729752 94530363 0.00003901 ABCC4 18 39 32 14 108 160
Recessive 7 2 rs10208470 75356624 0.00004381 2 49 38 52 122 108
Recessive 8 2 rs10205827 75356361 0.00004401 2 49 38 52 122 107
Recessive 9 12 rs4465416 118338125 0.00004502 CCDC60 19 28 42 16 131 135
Recessive 10 13 rs9576139 36396944 0.00004547 0 37 52 36 108 138
Recessive 11 13 rs1678395 94563955 0.0000476 ABCC4 16 40 33 11 101 170
Recessive 12 12 rs4300442 118324515 0.00005037 CCDC60 20 29 40 17 131 134
Recessive 13 2 rs1015802 153792446 0.00005759 8 20 60 1 77 204
Recessive 14 2 rs11680628 153839089 0.00006176 8 20 61 1 75 206
Recessive 15 2 rs1439630 153839620 0.00006204 10 24 55 3 82 197
Recessive 15 2 rs7556698 153850240 0.00006204 10 24 55 3 81 198
Recessive 17 9 rs10981230 113851385 0.00007136 MIR3134,SUSD1 35 38 16 50 152 80
Recessive 18 13 rs9557470 100094751 0.00007228 TMTC4 23 31 35 24 130 128
Recessive 19 1 rs4129058 5310402 0.00007338 2 59 28 50 131 101
Recessive 20 4 rs7670109 184691188 0.00008034 35 37 17 51 157 74

Model, the genetic model in which candidate SNPs were selected by GWAS; CHR, chromosome number.Related gene, the nearest gene from the SNP site; A/A, homozygote for the minor allele in each SNP.A/B, heterozygote for the major allele in each SNP; B/B, homozygote for the major allele in each SNP.*, Significant association after correction for multiple testing.