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. 2001 Aug;39(8):2794–2798. doi: 10.1128/JCM.39.8.2794-2798.2001

TABLE 1.

Sequences of the primers and probes used in the dengue NASBA assays

Primer or probe Sequencea Genome positionb (GenBank accession no.)
P1 primer 5′AATTCTAATACGACTCACTATAGGGGAGACAGCAGGATCTCTGGTCT3′ 10,632–10,653 (M87512)
P2 primer 5′GATGCAAGGTCGCATATGAGGGTTAGAGGAGACCCCTCCC3′ 10,497–10,516 (M87512)
Ru2+-labeled detector probe 5′GATGCAAGGTCGCATATGAG3′
Type 1 capture probe 5′GGGAAGCTGTATCCTGGTGGTAAGG3′ 10,550–10,574 (M87512)
Type 2 capture probe 5′ATGAAGCTGTAGTCTCACTGGAAGG3′ 10,557–10,581 (M20558)
Type 3 capture probe 5′AGGGAAGCTGTACCTCCTTGCAAAG3′ 10,530–10,554 (M93130)
Type 4 capture probe 5′GAGGAAGCTGTACTCCTGGTGGAAG3′ 10,483–10,507 (M14931)
Conserved capture probe 5′AAACAGCATATTGACGCTGGG3′ 10,609–10,629 (M87512)
a

Italicized bases represent overhang sequences of the primers: a T7 promoter sequence on P1, and a sequence homologous to the detector probe on P2. 

b

In bases.