Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2022 Feb 7;14(1):2029673. doi: 10.1080/19490976.2022.2029673

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2022 The Author(s). Published with license by Taylor & Francis Group, LLC.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 4. — Analysis of Bifidobacterium full length 16S rRNA genes and conserved proteins reveals discordant microdiversity. (a) Phylogenetic tree of full-length 16S rRNA gene sequences, extracted by barrnap. Red dots represent sequences that were not full-length. (b-d) Gene trees of (b) fructose-6-phosphate phosphoketolase (F66PK), (c) dihydropteroate synthase (FolC), and (d) hydroxyethylthiazole kinase (ThiM) protein sequences derived from assembled single cells and indicated reference genomes. All proteins were derived from Prodigal predicted proteins searched with BLAST at an e-value of 0.05. All sequences were aligned in MEGA-X using MUSCLE and Maximum-Likelihood trees were generated in MEGA-X.