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. 2022 Jan 25;11:e70173. doi: 10.7554/eLife.70173
Rate Parameter Optimized Rate (WT) Optimized rate (Scn4b-/-) Rate Equations
a11_variable1 2.3989e-02; 2.0761e-02; Where the transition rates are of the form:
a11_variable2 9.6108e + 02; 9.7685e + 02;
a12 8.5613e + 02; 8.3340e + 02; a11= Tfactor*1/(Input(1)*exp(-V/Input(2)));
a13 7.2682e + 01; 6.1087e + 01; a12= Input(3)*a11;
b11_variable1 1.7233e-01; 1.6995e-01; a13= Input(4)*a11;
b11_variable2 1.9691e + 01; 1.8560e + 01; b11= Tfactor*1/(Input(5)*exp(V/Input(6)));
b12 8.8549e + 01; 9.3042e + 01; b12= Input(7)*b11;
b13 1.4841e + 02; 1.7914e + 02; b13= Input(8)*b11;
a3_variable1 3.6734e-01; 3.9273e-01; a3= Tfactor*Input(9)*exp(-V/Input(10));
a3_variable2 9.8034e + 02; 9.8807e + 02; b3= Tfactor*Input(11)*exp((V)/Input(12));
b3_variable1 5.3241e + 01; 4.7402e + 01; a2= Tfactor*(Input(13)*exp(V/Input(14)));
b3_variable2 1.4204e + 01; 1.3469e + 01; b2= ((a13*a2*a3)/(b13*b3));
a2_variable1 8.7852e + 01; 8.1085e + 01; a6= Tfactor*(Input(15)*exp(V/Input(16)));
a2_variable2 9.9972e + 02; 9.9984e + 02; b6= Tfactor*Input(17)*exp(-V/Input(18));
a6_variable1 6.0921e + 02; 6.0756e + 02;
a6_variable2 8.6490e + 01; 7.8591e + 01; a2s = Tfactor*(Input(19)*exp(V/Input(20)));
b6_variable1 1.5645e + 02; 1.6214e + 02; b2s = Tfactor*(Input(21)*exp(-V/Input(22)));
b6_variable2 3.0317e + 01; 4.3656e + 01; a3s = Tfactor*Input(23)*exp(-V/Input(24));
a2s_variable1 1.5817e + 01; 2.3130e + 01; b3s = (a2s*a3s*a13)/(b2s*b13);
a2s_variable2 9.9982e + 02; 9.9969e + 02;
b2s_variable1 1.0010e-03; 1.0208e-03; Q10 = 3; T = 295;
b2s_variable2 1.1963e + 01; 1.1383e + 01; Tfactor = 1.0/(Q10^((37.0-(T-273))/10.0));
a3s_variable1 4.4773e-03; 2.8677e-03;
a3s_variable2 9.9993e + 02; 9.8330e + 02; Note: b2, b3s are constrained by microscopic reversibility.