Table 2.

Species Tree Inference Runtimes for All Tested Tools.

Data Set	FastMulRFS	DupTree	ASTRAL-Pro	SpeciesRax	MiniNJ
Primates13	62 s	18 s	38 s	14 s	2 s
Cyanobacteria36	19 s	26 s	12 s	14 s	<1 s
Fungi16	9 s	7 s	18 s	7 s	<1 s
Vertebrates22	9 min	5 min	2 min 45 s	2 min 30 s	7 s
Fungi60	16 min	17 min	1 min 30 s	1 min	2 s
Plant23	9 min	6 min	1 min 35 s	2 min	8 s
Life92	6 h	2 h 20 min	31 min	6 min	2 s
Archaea364	11 min	6 h	1 min	14 min	10 s
Plants83	4 h	2 h 40 min	1 h 40 min	8 min	27 s
Vertebrates188	14 days	3.5 days	12 h	1 h 5 min	53 s