Table 1.
Outlier Regions Containing the Top Population Branch Statistic Values Genome Wide, Indicating Candidates for Temporal Evolution.
| Chr. Arm | Start | Stop | Windows | Top Window PBS | Top Window P Value | Genes within 10 kb of Peak |
|---|---|---|---|---|---|---|
| 2R | 10450311 | 11002594 | 78 | 0.2077 | 4.0E−07 | Inr-a, Cyp6a22, Cyp6a17, Cyp6a23, Cyp6a19, Cyp6a9, Cyp6a20, Cyp6a21, Cyp6a8 |
| X | 8549577 | 8715140 | 26 | 0.1440 | 1.2E−06 | CR44507, CR44508, Hexo2, CG2004, CG1785, l(1)G0020 |
| 2R | 7935691 | 8252784 | 42 | 0.1019 | 3.6E−05 | Cyp6g2, Cyp6t3, CG8858, RpS11, Sr-CII, CG13171 |
| 3R | 24459660 | 25160620 | 88 | 0.1015 | 4.7E−05 | Doa, CG11828, DIP-gamma |
| X | 3159369 | 3404026 | 35 | 0.0837 | 8.9E−05 | CG10802, CG14270, CG10803, Gas8, DIP-alpha, CG13021 |
| 3R | 19412432 | 19432122 | 4 | 0.0872 | 1.4E−04 | CG10182, CG33337, CG16723, CG10183, CG10184, CG31145 |
| X | 16919722 | 17013929 | 14 | 0.0849 | 1.6E−04 | CG4991, CG16700, Arpc3B, CG5004 |
| 3R | 8856384 | 8882684 | 3 | 0.0848 | 2.2E−04 | ry, CG11668, snk, CG11670, Hsc70-2, CG31157, CG7966, pic, sim |
| X | 18020585 | 18110534 | 14 | 0.0782 | 2.3E−04 | CG32553, mir-369, mir-210, CG34133, ari-1, CG43229 |
| X | 9526895 | 9557458 | 4 | 0.0712 | 3.6E−04 | Ptpmeg2, CG3106, nej |
| 3L | 10456489 | 10564065 | 20 | 0.0732 | 4.1E−04 | A2bp1 |
| 2L | 22212037 | 22940523 | 16 | 0.0742 | 6.2E−04 | IR40a, CR12628 |
| 2R | 6988767 | 7043417 | 10 | 0.0677 | 9.6E−04 | Cyp12d1-p, Cyp12d1-d, BBS4 |
| X | 18302387 | 18449417 | 21 | 0.0647 | 9.7E−04 | CG32548, CG6290, CG32551, CG34841, CG32547 |
| 2R | 9169961 | 9219512 | 7 | 0.0688 | 1.1E−03 | Dh31-R, CG4734, CG17047 |
| X | 10212150 | 10403274 | 22 | 0.0585 | 1.2E−03 | CG32681, CG17841, Psf3, flw |
| X | 12025462 | 12179467 | 23 | 0.0569 | 1.5E−03 | Ten-a, CG1924 |
| 2R | 6448156 | 6451900 | 1 | 0.0657 | 1.5E−03 | psq |
| X | 12439233 | 12514400 | 10 | 0.0557 | 1.7E−03 | Sec16, CG1463, Fpgs, CG11085, CR44568 |
| 3L | 4892820 | 4920140 | 4 | 0.0643 | 1.7E−03 | Dnah3, CG13705, CG13704, Rh50 |
Notes.—Regions were defined as described in Materials and Methods. Raw P values based on demographic simulations are also provided. Coordinates reflect release 5 of the Drosophila melanogaster reference genome.