Table 2.

Windows Containing the Highest SNP PBS Values Genome Wide Are Shown, Excluding Those Associated with Window PBS Outlier Regions, Based on Our “Pseudo-Pool” Treatment of the Old Sample Data.

Chr. Arm	Window Start	Window Stop	Window PBS	Max SNP PBS	Max SNP Position	Freq. Old	Freq. Fall	Freq. Spring	Location of Top SNP
X	12427571	12433229	0.0240	0.4909	12428485	0.3545	0.0063	0.0584	Intron of hwt
2R	9039862	9049014	0.0322	0.4554	9047945	0.2071	0.0000	0.0000	Exon of Nrk
2L	11494112	11498367	0.0115	0.4334	11497953	0.3383	0.0267	0.0380	Intron of Cog8
2R	9022225	9039861	0.0268	0.4101	9038358	0.1857	0.0000	0.0000	Intron of Ack-like
2R	11997670	12004051	0.0105	0.4004	12000155	0.1949	0.0032	0.0040	Exon of Asph
3R	15348249	15355833	0.0172	0.3973	15353076	0.4902	0.1768	0.0430	Intron of Dys
2L	6009244	6014164	0.0184	0.3871	6011436	0.3515	0.0662	0.0311	Intron of CG9098
X	17218725	17225201	0.0200	0.3792	17221539	0.4603	0.1121	0.1054	Intergenic, close to B-H2
2L	12722716	12729408	0.0289	0.3491	12725414	0.6217	0.2521	0.1833	Intron of MRP1
2R	11931245	11941772	0.0180	0.3457	11935869	0.1558	0.0000	0.0000	Exon of CG8405
2R	6608168	6617713	0.0176	0.3419	6616156	0.3338	0.0729	0.0370	5′-UTR ofr Rab3
X	19627456	19638362	0.0179	0.3370	19629237	0.7745	0.1975	0.4863	Intergenic, between AP-1-2beta and CG14234
X	10416049	10430412	0.0232	0.3342	10418289	0.3500	0.0634	0.0344	Intron of spri
2L	16801631	16808037	0.0300	0.3276	16801968	0.3699	0.0961	0.0328	Exon of CG13280

Note.—Coordinates reflect release 5 of the Drosophila melanogaster reference genome.