Laboratory studies
|
B[a]P 7,8-diol 9,10-epoxide
|
dG-N2-deoxyguanosine |
G → T, mtDNA deletions, decrease mtDNA CN |
Biochemical |
Oligonucleotide substrates |
Graziewicz et al. (2004)[133] |
B[a]P; N-ethyl-N-nitrosourea (ENU)
|
dG-N2-deoxyguanosine; alkylation |
None |
M. musculus; bone marrow and liver |
RMC; 12S rRNA and ND5 sequencing |
Valente et al. (2016)[134] |
Methyl methanesulfonate (MMS)
|
Alkylation |
C → G |
S. cerevisiae
|
16S rRNA sequencing |
Stumpf and Copeland (2014) [135] |
Nucleoside reverse transcriptase inhibitors (NRTIs)
|
Nucleotide analog misincorporation |
mtDNA depletion |
- |
- |
Young (2017) [136] |
Cadmium Chloride
|
Unknown; hypothesize oxidative stress |
Accumulation of common mtDNA deletion |
Rat; renal cortex |
PCR |
Takaki et al. (2004) [137] |
Epidemiological studies
|
Lead
|
Unknown; hypothesize oxidative stress |
Increased incidence of transition mutations (T:A → C:G) |
Blood from male workers |
Whole genome sequencing |
Mani et al. (2020) [138] |
Pesticides
|
Unknown; mixture |
Inadequate statistical power |
Blood and lung tissue from farmers |
Whole genome sequencing |
Wang and Zhao (2012) [139] |
Ultraviolet C
|
Pyrimidine dimers |
Clonal expansion of common mtDNA deletion |
Skin tissue from patients |
Amplicon sequencing |
Birket and Birch-Machin (2007) [140] |
Smoking, NRTIs, age
|
Not measured; bulky adducts, ROS, POLG inhibition |
Age: T:A → C:G; smoking: ↑ heteroplasmy (clonal expansion) |
Blood from smoking and non-smoking females, HIV+ patients |
D-loop |
Ziada et al. (2019) [141] |
Population genetics
|
Radiation
|
Break or oxidative damage |
Increased haplotype diversity |
Chernobyl bank vole |
Whole genome sequencing |
Kesäniemi et al. (2020) [142], Baker et al. (2017) [143] |
Industrial pollution (heavy metals, PAHs)
|
Unknown; mixture |
Reduced haplotype diversity |
Azerbaijan marsh frog |
CYTB, D-loop |
Matson et al. (2006) [144] |