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. Author manuscript; available in PMC: 2022 Aug 1.
Published in final edited form as: Nat Protoc. 2021 Jul 7;16(8):4031–4067. doi: 10.1038/s41596-021-00575-5

Figure 7. Assessment of inhibitory cell types from the mouse primary visual cortex against reference inhibitory cell types (high resolution).

Figure 7.

a Heatmap based on MetaNeighbor AUROCs. Reference cell types are shown as columns, query cell types as rows. Global red rectangles indicate good replicability structure, suggesting replicability for Sncg, Vip, Lamp5, Sst and Pvalb inhibitory subtypes. b Distribution of AUROC scores for the “Pvalb Cpne5” cell type from the primary visual cortex (query cell type) against all reference cell types. Best hits (against the “Pvalb Vipr2_2) are shown by red lines, all other hits are shown as a gray background distribution. Replicating cell types have substantially higher AUROC scores than background cell types.