TABLE 1.
Enzyme | Incubation temp (°C) | Digestion time (min) | No. of ribotypes among 16 isolates | SID |
---|---|---|---|---|
PvuII | 37 | 20 | 15 | 0.992 |
EcoRI | 37 | 20 | 12 | 0.950 |
BstEII | 60 | 120 | 10 | 0.925 |
BanI | 37 | 120 | 10 | 0.917 |
XhoI | 37 | 120 | 10 | 0.900 |
BglII | 37 | 120 | 8 | 0.883 |
EagI | 37 | 120 | 9 | 0.883 |
AseI | 37 | 120 | 7 | 0.817 |
HincII | 37 | 120 | 5 | 0.792 |
PstI | 37 | 120 | 6 | 0.617 |
NcoI | 37 | 120 | 4 | 0.617 |
XbaI | 37 | 120 | 1 | 0 |
BsoBI | 60 | 120 | NDa | ND |
ClaI | 37 | 120 | ND | ND |
StyI | 37 | 120 | ND | ND |
ND, not determined. The enzymes BsoBI, ClaI, and StyI showed incomplete digests with spurious and variable high-molecular-weight bands, which did not allow assignment of distinct ribotypes.