TABLE 1.
Percentages of identity and GC content of nucleotide and amino acid sequences of BoHV-5 strain P160/96 and BoHV-5 strain ISO97/45
| BoHV-5 strain P160/96 |
BoHV-5 strain ISO97/45 |
||||||
|---|---|---|---|---|---|---|---|
| Gene | Predicted product | % nt identitya | % aa identityb | %GC | % nt identitya | % aa identityb | %GC |
| Circ | Myristylated virion protein | 99.9 | 99.6 | 72.8 | 99.7 | 99.6 | 73 |
| UL54 | Regulates and transports RNA | 100 | 100 | 74.1 | 99.7 | 99.8 | 74.1 |
| UL53 | Glycoprotein K | 100 | 100 | 76.9 | 99.6 | 99.7 | 77 |
| UL52 | Component of DNA helicase/primase complex | 100 | 100 | 76.6 | 99.4 | 99.4 | 76.4 |
| UL51 | Palmitoylated protein | 99.9 | 100 | 75.9 | 99.7 | 100 | 76 |
| UL50 | Deoxyuridine triphosphatase | 100 | 100 | 72.2 | 99.2 | 98.8 | 72.4 |
| UL49.5 | Glycoprotein N | 100 | 100 | 68.8 | 100 | 100 | 68.8 |
| UL49 | Tegument protein | 100 | 100 | 77.2 | 99.4 | 99.3 | 77.2 |
| UL48 | Trans-inducing factor | 99.9 | 100 | 72.9 | 99.5 | 99.6 | 73.1 |
| UL47 | Tegument phosphoprotein | 99.9 | 100 | 72.4 | 99.7 | 99.9 | 72.3 |
| UL46 | Tegument protein | 99.7 | 99.7 | 74.8 | 99.5 | 99.7 | 74.6 |
| UL44 | Glycoprotein C | 99.7 | 99.8 | 75.4 | 99.4 | 99.4 | 75.7 |
| UL43 | Virion protein | 100 | 100 | 82 | 99.1 | 100 | 82 |
| UL42 | Processivity factor for DNA polymerase | 99.9 | 100 | 74.5 | 98.6 | 98.8 | 73.8 |
| UL41 | Virion host shutoff factor | 99.9 | 100 | 74 | 99.5 | 99.6 | 73.3 |
| UL40 | Ribonucleotide reductase small subunit | 100 | 100 | 62.8 | 99.9 | 100 | 62.9 |
| UL39 | Ribonucleotide reductase large subunit | 99.9 | 99.9 | 70.6 | 99.8 | 99.6 | 70.4 |
| UL38 | Capsid protein | 99.8 | 99.4 | 75 | 99.3 | 99.2 | 74.4 |
| UL37 | Tegument protein | 99.9 | 99.9 | 79.4 | 99.5 | 99.6 | 79.2 |
| UL36 | Very large tegument protein | 99.9 | 99.8 | 79.8 | 99.7 | 99.5 | 79.8 |
| UL35 | Capsid protein | 100 | 100 | 73.3 | 100 | 100 | 73.3 |
| UL34 | Virion protein | 100 | 100 | 74.8 | 99.9 | 100 | 74.7 |
| UL33 | Capsid packaging protein | 100 | 100 | 71.5 | 99.7 | 100 | 71.2 |
| UL32 | Cleavage and packaging protein | 99.9 | 99.8 | 76.1 | 99.7 | 99.8 | 76.1 |
| UL31 | UL34-associated nuclear protein | 99.6 | 98.9 | 73.6 | 97 | 96.6 | 73.9 |
| UL30 | DNA polymerase, catalytic subunit | 99.7 | 99.5 | 72.2 | 99.6 | 99.7 | 72.5 |
| UL29 | Single-stranded DNA binding protein | 100 | 100 | 73.3 | 99.7 | 99.9 | 73.3 |
| UL28 | Cleavage and packaging protein | 99.1 | 98.7 | 76.2 | 99.8 | 99.4 | 76.5 |
| UL27 | Glycoprotein B | 100 | 100 | 71.6 | 99.8 | 99.8 | 71.4 |
| UL26.5 | Capsid scaffolding protein | 100 | 100 | 79.6 | 99.7 | 99.7 | 79.7 |
| UL26 | Capsid maturation serine protease | 100 | 100 | 78.5 | 99.7 | 99.8 | 78.5 |
| UL25 | DNA packaging virion protein | 99.8 | 99.5 | 77.3 | 99.6 | 99.7 | 77 |
| UL24 | Putative membrane-associated protein | 98.5 | 97.5 | 76.4 | 99.8 | 99.6 | 77.1 |
| UL23 | Thymidine kinase | 99.9 | 100 | 78.6 | 99.7 | 100 | 78.8 |
| UL22 | Glycoprotein H | 99.9 | 99.8 | 76.2 | 99.5 | 99.5 | 76.2 |
| UL21 | Tegument protein | 99.9 | 99.8 | 77.6 | 99.4 | 99.7 | 77.3 |
| UL20 | Virion protein | 98.6 | 97.2 | 76.9 | 99.9 | 100 | 78 |
| UL19 | Major capsid protein | 99.9 | 99.9 | 72.5 | 99.7 | 99.9 | 72.5 |
| UL18 | Capsid protein | 100 | 100 | 75.3 | 99.8 | 100 | 75.4 |
| UL17 | Tegument protein | 100 | 100 | 80.2 | 99.6 | 99.7 | 80.3 |
| UL16 | Virion protein | 99.8 | 99.7 | 77.9 | 99.9 | 100 | 78 |
| UL15 | DNA cleavage, packaging protein | 99.9 | 99.7 | 71.3 | 99.5 | 99.9 | 71.5 |
| UL14 | Minor tegument protein | 100 | 100 | 75.3 | 99.6 | 99.1 | 75.1 |
| UL13 | Virion serine/threonine protein kinase | 100 | 100 | 74.7 | 99.7 | 99.6 | 74.7 |
| UL12 | Alkaline exonuclease | 98.6 | 98.8 | 75.3 | 99.0 | 98.8 | 75.3 |
| UL11 | Myristylated protein | 100 | 100 | 75.2 | 100 | 100 | 75.2 |
| UL10 | Glycoprotein M | 99.9 | 100 | 76 | 99.4 | 99.8 | 75.9 |
| UL9 | Origin-binding protein | 99.9 | 99.9 | 74.5 | 99.6 | 99.9 | 74.5 |
| UL8 | Component of DNA helicase/primase complex | 100 | 100 | 76.7 | 99.7 | 99.7 | 76.6 |
| UL7 | Virion-associated protein | 100 | 100 | 72.7 | 100 | 100 | 72.7 |
| UL6 | Virion protein | 98.3 | 98.3 | 73.4 | 99.5 | 99.9 | 73.8 |
| UL5 | Component of DNA helicase/primase complex | 99.9 | 100 | 66.5 | 97.0 | 98.6 | 68.2 |
| UL4 | Nuclear protein | 100 | 100 | 74.6 | 99.3 | 99.5 | 74.3 |
| UL3.5 | Virion protein | 100 | 100 | 80.1 | 99.6 | 99.3 | 80.1 |
| UL3 | Phosphoprotein | 99.8 | 99.5 | 74.2 | 97.3 | 95 | 74.4 |
| UL2 | Uracil DNA glycosylase | 100 | 100 | 75.5 | 99.8 | 99.3 | 75.3 |
| UL1 | Glycoprotein L | 100 | 100 | 74.4 | 99.8 | 100 | 74.6 |
| UL0.7 | Unknown product | 99.8 | 99.5 | 77.4 | NAc | NA | NA |
| BICP0 | Immediate-early trans-activator protein with zinc finger | 99.9 | 100 | 76.7 | 99.0 | 99 | 76.9 |
| BICP4 | Positive and negative gene regulator | 100 | 100 | 82.2 | 98.3 | 97.3 | 82.2 |
| BICP22 | Transcription factor | 98.3 | 98.1 | 75.3 | 98.4 | 97.8 | 75.1 |
| US1.67 | Virion protein | 100 | 100 | 73.1 | 99.3 | 98.8 | 73 |
| US2 | Tegument protein | 100 | 100 | 72.4 | 99.0 | 98.2 | 72.5 |
| US3 | Virion serine/threonine protein kinase | 99.9 | 100 | 73.9 | 99.8 | 99.5 | 74.1 |
| US4 | Glycoprotein G | 100 | 100 | 68.6 | 99.8 | 99.5 | 68.7 |
| US6 | Glycoprotein D | 100 | 100 | 73.4 | 99.5 | 99.5 | 73.8 |
| US7 | Glycoprotein I | 99.9 | 100 | 76.6 | 99.6 | 99.7 | 76.5 |
| US8 | Glycoprotein E | 99.9 | 100 | 76.3 | 99.1 | 98.8 | 76.2 |
| US9 | Virion protein | 100 | 100 | 76 | 99.8 | 99.3 | 75.8 |
| BICP22 | Transcription factor | 98.3 | 98.1 | 75.3 | 97.8 | 96.8 | 75.2 |
| BICP4 | Positive and negative gene regulator | 100 | 100 | 82.2 | 98.4 | 97.5 | 82 |
a
nt, nucleotide.
b
aa, amino acid.
c
NA, not applicable.