Table 1. SARS-CoV-2 HLA class I supermotifs involving three or more supertypes.
| Protein | Supermotif sequence | % allele supertype coverage | Number of covered supertypes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A01 | A01 A03 | A01 A24 | A02 | A03 | A24 | B07 | B08 | B27 | B44 | B58 | B62 | |||
| ORF1ab | 5533-VVYRGTTTY-5541 | 76 | 100 | 53 | 72 | 62 | 5 | |||||||
| ORF1ab | 1582-QVVDMSMTY-1590 | 78 | 100 | 52 | 62 | 4 | ||||||||
| ORF1ab | 2273-STNVTIATY-2281 | 80 | 100 | 67 | 58 | 4 | ||||||||
| ORF1ab | 4072-VVIPDYNTY-4080 | 82 | 100 | 67 | 62 | 4 | ||||||||
| ORF1ab | 4673-KLFDRYFKY-4681 | 50 | 100 | 67 | 54 | 4 | ||||||||
| ORF1ab | 6154-HSIGFDYVY-6162 | 74 | 100 | 61 | 50 | 4 | ||||||||
| ORF1ab | 77-RTAPHGHVM-85 | 60 | 89 | 60 | 3 | |||||||||
| ORF1ab | 110-HVGEIPVAY-118 | 72 | 100 | 60 | 3 | |||||||||
| ORF1ab | 568-TILDGISQY-576 | 74 | 100 | 60 | 3 | |||||||||
| ORF1ab | 906-YLFDESGEF-914 | 78 | 70 | 68 | 3 | |||||||||
| ORF1ab | 1768-VMYMGTLSY-1776 | 52 | 100 | 62 | 3 | |||||||||
| ORF1ab | 1806-MMSAPPAQY-1814 | 62 | 100 | 62 | 3 | |||||||||
| ORF1ab | 2876-TTNGDFLHF-2884 | 58 | 78 | 78 | 3 | |||||||||
| ORF1ab | 2960-SIIQFPNTY-2968 | 74 | 100 | 60 | 3 | |||||||||
| ORF1ab | 3103-GVYSVIYLY-3111 | 70 | 100 | 61 | 3 | |||||||||
| ORF1ab | 4533-TLKEILVTY-4541 | 58 | 100 | 60 | 3 | |||||||||
| ORF1ab | 5267-QEYADVFHLY-5276 | 100 | 74 | 57 | 3 | |||||||||
| ORF1ab | 5981-SMMGFKMNY-5989 | 100 | 64 | 60 | 3 | |||||||||
| S | 192-FVFKNIDGY-200 | 72 | 100 | 52 | 3 | |||||||||
| S | 269-YLQPRTFLL-277 | 88 | 74 | 87 | 3 | |||||||||