Table 2.
Primers sequences use for the qPCR analysis of selected bacteria groups.
| Target group | Primer sequences (5′–3′) | Annealing temp. (°C) | References |
|---|---|---|---|
| Bacillus spp. |
F-GCA ACG AGC GCA ACC CTT GA R-TCA TCC CCA CCT TCC CC GGT |
63 | 33 |
| Bacteroides spp. |
F-GAG AGG AAG GTC CCC CAC R-CGC TAC TTG GCT GGT TCA G |
63 | 34 |
| Bifidobacterium spp. |
F-GCG TCC GCT GTG GGC R-CTT CTC CGG CAT GGT GTT G |
63 | 35 |
| Enterobacteriaceae |
F-CAT TGA CGT TAC CCG CAG AAG AAG C R-CTC TAC GAG ACT CAA GCT TGC |
63 | 36 |
| Lactobacillus spp. |
F-CAC CGC TAC ACA TGG AG R-AGC AGT AGG GAA TCT TCC A |
63 | 37 |
| Ruminococcus spp. |
F-GGC GGC YTR CTG GGC TTT R-CCA GGT GGA TWA CTT ATT GTG TTA A |
63 | 38 |
| Total bacteria |
F-CGG YCC AGA CTC CTA CGG G R-TTA CCG CGG CTG CTG GCA C |
63 | 39 |