Chemicals, peptides, and recombinant proteins |
T-PER Tissue Protein Extraction Reagent |
Thermo Fisher Scientific |
Cat# 78510 |
protease inhibitor (1 pill/100ml T-PER) |
Sigma-Aldrich |
Cat# S8820 |
DPP-4 inhibitor (20μl/ml T-PER) |
Millipore-Sigma |
Cat# SKUDPP4 |
BCA protein analysis |
Pierce-Fisher |
Cat#23225 |
FailSafe PCR PreMix |
Lucigen Corp, Middleton,WI |
Cat# FS99250 |
SYBR Safe |
Invitrogen |
Cat# S33102
|
TRIzol reagent |
Thermo Fisher Scientific |
Cat# 15596026 |
PureLink RNA mini kit |
Thermo Fisher Scientific |
Cat# K157001 |
RNeasy Mini kit |
Qiagen |
Cat#74106 |
iScript cDNA synthesis kit |
BioRad |
Cat# 1708891 |
SsoAdvanced Universal Probes Supermix |
BioRad |
Cat# 1725281 |
Critical commercial assays |
Dual Dual-Luciferase Assay System |
Promega |
Cat# E1910 |
Ultra-Sensitive Mouse Insulin ELISA |
Crystal Chem |
Cat# 90080 |
QuantiChrom Iron Assay |
BioAssay Systems |
Cat# DIFE-250 |
Hepcidin-Murine CompeteTM ELISA |
Intrinsic Life Sciences |
Cat# HMC-001 |
V-PLEX GLP-1 Total Kit |
Meso Scale Discovery |
Cat# K1503PD |
TaqMan gene expression Assay - Hif2a (Epas1) |
Thermofisher Scientific |
Mm01236112_m1 |
TaqMan gene expression Assay - Hif1a |
Thermofisher Scientific |
Mm00468869_m1 |
TaqMan gene expression Assay - Vhl |
Thermofisher Scientific |
Mm00494137_m1 |
TaqMan gene expression Assay - Dmt1 (Slc11a2) |
Thermofisher Scientific |
Mm00435363_m1 |
TaqMan gene expression Assay - Dcytb (Cybrd1) |
Thermofisher Scientific |
Mm01335930_m1 |
TaqMan gene expression Assay - Phd2 (Egln1) |
Thermofisher Scientific |
Mm00459770_m1 |
TaqMan gene expression Assay - Neu3 |
Thermofisher Scientific |
Mm00479379_m1 |
TaqMan gene expression Assay - Pdk1 |
Thermofisher Scientific |
Mm01276567_m1 |
TaqMan gene expression Assay - Pgk1 |
Thermofisher Scientific |
Mm00435617_m1 |
TaqMan gene expression Assay - Glut1 (Slc2a1) |
Thermofisher Scientific |
Mm05908127_s1 |
TaqMan gene expression Assay - Rpl32 |
Thermofisher Scientific |
Mm07306626_gH |
TaqMan gene expression Assay - Actb |
Thermofisher Scientific |
Mm02619580_g1 |
Deposited data |
Array data submitted to GEO database |
This paper |
GSE169403 |
Experimental models: Organisms/strains |
VhlF/F;Vilcre
|
Prof.dr. Y. Shah, Dept. Mol & Int Phys, University of Michigan |
N/A |
Hif2αF/F;VilWt/Wt, Hif2αF/F-VilCreERT
|
Prof.dr. Y. Shah, Dept. Mol & Int Phys, University of Michigan |
N/A |
HampF/F;AlbWt/Wt HampF/F-AlbCre
|
Prof.dr. Y. Shah, Dept. Mol & Int Phys, University of Michigan |
N/A |
Gcgstopflox
|
Prof.dr. R.J. Seeley, Dept. Surgery, University of Michigan |
N/A |
Glp1rstopflox
|
Prof.dr. R.J. Seeley, Dept. Surgery, University of Michigan |
N/A |
FVB.129S6Gt(ROSA) 26Sortm2(HIF1A/luc)Kael)/J – ODD-Luc |
Jackson laboratory |
Stock no.006206 |
C57BL/6J |
Jackson Laboratory |
Stock no.000664 |
Long-Evans rats |
Harlan Laboratories |
HsdBlu: LE |
Oligonucleotides |
Oligonucleotides are listed in Table S7
|
N/A |
N/A |
Software and algorithms |
Graphpad Prism |
Graphpad Software |
Version 8.1.2 |
R A Language and Environment for Statistical Computing |
R |
R Core Team (2017)
|
Expression console v.1.3.0.187 |
Thermo Fisher Scientific |
N/A |
CARMAweb |
Medical University Innsbruck |
Rainer et al. (2006)
|
QIAGEN Ingenuity Pathway Analysis, IPA |
QIAGEN |
www.qiagen.com/ingenuity
|
Other |
Regular chow diet |
Envigo Teklad |
Cat# 7012 |
60% HFD |
Research Diets, Inc |
Cat# D12492 |
Custom high fat (45% FDC) AIN-93G with 35ppm Fe |
Dyets Inc, Pa |
Cat# 115244 |
Custom high fat (45% FDC) AIN-93G with 350ppm Fe |
Dyets Inc, Pa |
Cat# 115245 |
Osmolite OneCal liquid diet |
Abbott, Columbus, OH |
Cat# 64633 |
Ensure Plus |
Abbott |
Cat # 57263 |
Accu-Chek Aviva Meter |
Accu-Chek, Roche Diabetes Care |
https://www.accu-chek.com
|
Endopath ETS-FLEX 35mm Stapler |
Ethicon endo-surgery |
VASECR35 |
Nuclear Magnetic Resonance |
EchoMRI LLC, USA |
EchoMRI-900 |
Ovation PicoSL WTA System V2 |
Nugen |
Part no. 3312 |
GeneChip Rat Gene 2.1 ST Array Plate |
Thermofisher Scientific |
Cat# 902143 |