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. 2022 Feb 12;3:100021. doi: 10.1016/j.crviro.2022.100021

Table 2.

Primer sequences used for Real-Time PCR.

Target Primer sequence Accession No. Annealing temp (oC)
Pan-IFNα Fwd CACACAGGCTTCCAGGCATTC NC_045512.2 61
Rev TCTTCAGCACAAAGGACTCATCTG
IFN-β Fwd TGCTCTCCTGTTGTGCTTCTCCAC NM_002176.4 61
Rev ATAGATGGTCAATGCGGCGTCC
IFN-λ1 Fwd CGCCTTGGAAGAGTCACTCA NM_172140.2 61
Rev GAAGCCTCAGGTCCCAATTC
IRF-1 Fwd TCTTAGCATCTCGGCTGGACTTC NM_002198.3 61
Rev CGATACAAAGCAGGGGAAAAGG
IRF-7 Fwd GATGTCGTCATAGAGGCT GTTGG NM_004029.4 61
Rev TGGTCCTGGTGAAGCTGGAA
ISG15 Fwd GAGAGGCAGCGAACTCATCT NM_005101.4 60
Rev AGGGACACCTGGAATTCGTT
ISG54 Fwd ATTCTATCACCAAGCCCGTGG NM_001547.5 60
Rev TGGAGTCTGGAAGCCTCATCC
ISG56 Fwd CAGCAACCATGAGTACAAAT NM_001548 60
Rev AAGTGACATCTCAATTGCTC
OAS1 Fwd GCCCTGGGTCAGTTGACTGG NM_016816 60
Rev TGAAGCAGGTGGAGAACTCGC
PKR Fwd ACACTCGTCTCTGAATCATC NM_002759 60
Rev GAGACCATTCATAAGCAACG
IFIT1 Fwd GATCTCAGAGGAGCCTGGCTAA NM_001548.5 60
Rev TGATCATCACCATTTGTACTCATGG
IFITM3 Fwd GATGTGGATCACGGTGGAC NM_021034.3 61
Rev AGATGCTCAAGGAGGAGCAC
VIPERIN Fwd GAGAGCCATTTCTTCAAGACC NM_080657 60
Rev CTATAATCCCTACACCACCTCC
GAPDH Fwd TACTCCTTGGAGGCCATGTG NM_001357943.2 61
Rev CACAGTCCATGCCATCACTG