Table 2.
Primer sequences used for Real-Time PCR.
Target | Primer sequence | Accession No. | Annealing temp (oC) | |
---|---|---|---|---|
Pan-IFNα | Fwd | CACACAGGCTTCCAGGCATTC | NC_045512.2 | 61 |
Rev | TCTTCAGCACAAAGGACTCATCTG | |||
IFN-β | Fwd | TGCTCTCCTGTTGTGCTTCTCCAC | NM_002176.4 | 61 |
Rev | ATAGATGGTCAATGCGGCGTCC | |||
IFN-λ1 | Fwd | CGCCTTGGAAGAGTCACTCA | NM_172140.2 | 61 |
Rev | GAAGCCTCAGGTCCCAATTC | |||
IRF-1 | Fwd | TCTTAGCATCTCGGCTGGACTTC | NM_002198.3 | 61 |
Rev | CGATACAAAGCAGGGGAAAAGG | |||
IRF-7 | Fwd | GATGTCGTCATAGAGGCT GTTGG | NM_004029.4 | 61 |
Rev | TGGTCCTGGTGAAGCTGGAA | |||
ISG15 | Fwd | GAGAGGCAGCGAACTCATCT | NM_005101.4 | 60 |
Rev | AGGGACACCTGGAATTCGTT | |||
ISG54 | Fwd | ATTCTATCACCAAGCCCGTGG | NM_001547.5 | 60 |
Rev | TGGAGTCTGGAAGCCTCATCC | |||
ISG56 | Fwd | CAGCAACCATGAGTACAAAT | NM_001548 | 60 |
Rev | AAGTGACATCTCAATTGCTC | |||
OAS1 | Fwd | GCCCTGGGTCAGTTGACTGG | NM_016816 | 60 |
Rev | TGAAGCAGGTGGAGAACTCGC | |||
PKR | Fwd | ACACTCGTCTCTGAATCATC | NM_002759 | 60 |
Rev | GAGACCATTCATAAGCAACG | |||
IFIT1 | Fwd | GATCTCAGAGGAGCCTGGCTAA | NM_001548.5 | 60 |
Rev | TGATCATCACCATTTGTACTCATGG | |||
IFITM3 | Fwd | GATGTGGATCACGGTGGAC | NM_021034.3 | 61 |
Rev | AGATGCTCAAGGAGGAGCAC | |||
VIPERIN | Fwd | GAGAGCCATTTCTTCAAGACC | NM_080657 | 60 |
Rev | CTATAATCCCTACACCACCTCC | |||
GAPDH | Fwd | TACTCCTTGGAGGCCATGTG | NM_001357943.2 | 61 |
Rev | CACAGTCCATGCCATCACTG |