| ACN | acetonitrile |
| CZE | capillary zone electrophoresis |
| DTT | dithiothreitol |
| EtOH | ethanol |
| FA | formic acid |
| FF | fresh frozen |
| FFPE | formalin-fixed paraffin embedded |
| GRAVY | grand average of hydropathy |
| IAA | iodoacetamide |
| IMER | immobilized enzyme reactors |
| iPAD | integrated proteome analysis devices |
| LCM | laser capture microdissection |
| NSAF | normalized spectral abundance factor |
| OCT | optimal cutting temperature |
| TFA | trifluoroacetic acid |