Table 3.
The result information of 12 optimal feature genes in limma package analysis
| Gene symbol | GSE12288 | GSE7638 | GSE66360 | Integrated dataset | ||||
|---|---|---|---|---|---|---|---|---|
| Foldchange | Adjusted p | Foldchange | Adjusted p | Foldchange | Adjusted p | Foldchange | Adjusted p | |
| BCL6 | 1.07 | 2.36E−01 | 1.20 | 7.07E−03 | 2.86 | 2.93E−09 | 1.27 | 1.34E−06 |
| CA12 | 1.05 | 4.18E−04 | 1.06 | 1.99E−03 | 1.00 | 9.94E−01 | 1.08 | 6.80E−05 |
| CAMK2B | 0.88 | 1.02E−22 | 0.95 | 4.57E−02 | 1.02 | 8.29E−01 | 0.90 | 3.94E−12 |
| CNGB1 | 0.89 | 2.72E−08 | 0.93 | 1.39E−02 | 0.83 | 4.21E−02 | 0.88 | 1.22E−09 |
| DDC | 0.90 | 1.03E−17 | 0.92 | 6.26E−03 | 1.00 | 9.87E−01 | 0.88 | 7.23E−12 |
| DERL1 | 1.03 | 1.91E−01 | 1.29 | 4.81E−19 | 0.88 | 4.74E−01 | 1.17 | 3.29E−06 |
| HCK | 1.07 | 1.67E−01 | 1.16 | 5.43E−06 | 2.09 | 1.10E−03 | 1.28 | 9.15E−07 |
| HTR4 | 1.11 | 4.11E−10 | 1.00 | 9.68E−01 | 1.09 | 4.12E−01 | 1.10 | 8.22E−06 |
| KISS1 | 0.78 | 3.49E−22 | 0.90 | 3.42E−02 | 0.92 | 2.26E−01 | 0.84 | 1.05E−15 |
| KLK2 | 1.08 | 5.39E−09 | 1.06 | 3.58E−02 | 0.88 | 1.69E−01 | 1.09 | 3.93E−05 |
| LILRA2 | 1.04 | 3.88E−01 | 1.19 | 1.74E−06 | 2.22 | 7.91E−06 | 1.25 | 2.60E−07 |
| MTF2 | 1.07 | 1.17E−04 | 1.27 | 1.02E−08 | 0.81 | 1.22E−01 | 1.15 | 3.07E−06 |
Integrated dataset was the combination of GSE12288, GSE7638 and GSE66360; foldchange, the fold change of the average gene expressional level going from control group to case group; adjusted P, the P value adjusted by Benjamini–Hochberg in comparing the gene expressional level between case group and control group