Table 2. The secondary structure of SHMT gene family in Solanum lycopersicum.
Blue indicates alpha helix; Green indicates beta turn; Red indicates extended strand; Pink indicates random coil.
| Protein | Alpha helix (%) | Beta turn (%) | Random coil (%) | Distribution of secondary structure elements |
|---|---|---|---|---|
| SlSHMT1 | 40.07 | 5.89 | 38.72 |
|
| SlSHMT2 | 46.91 | 6.95 | 33.01 |
|
| SlSHMT3 | 45.26 | 6.58 | 35.01 |
|
| SlSHMT4 | 44.80 | 6.16 | 35.24 |
|
| SlSHMT5 | 42.75 | 6.49 | 36.26 |
|
| SlSHMT6 | 42.13 | 7.02 | 36.05 |
|
| SlSHMT7 | 44.59 | 5.94 | 36.94 |
|