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. 2022 Jan 21;12(1):153–171. doi: 10.3233/JPD-212818

Fig. 4.

Fig. 4

LocusZoom plot for PD GWAS PLPP4 locus. Imputed and genotyped variants passing QC in the PLPP4 gene +/- 100 kb (10 : 122116466-122449376) mapped to genome build GRCh37. The only coding gene in the region is PLPP4, other include pseudogenes (AC073587.1) and long non-coding RNA (LINC01561, AC023282.1, WDR11-AS1). The variant with lowest p-value (index) is indicated as a purple diamond. Marker colors indicate the strength of LD as r2 between the index variant and other variants in the 1000 Genomes EUR population.