TABLE 1.
Sources of hsp65 sequences used for construction of algorithm
| Organism | Strain |
|---|---|
| M. tuberculosis complex | M15467, S76635, U17957, AD000014, U55825, AL021932 (H37Rv), M17705 (BCG), U55833 (M. bovis), U17925 (M. bovis) |
| M. avium | AF281650, AF126033, AF126030, AF126031, AF234261, U85632, U17922, AF126032, AF281650 |
| M. intracellulare | U85637, U55828, U85638, U85638, U55830, U85636, U85635, U17944, AF126035, AF126034, U55829, U85633, U17943 |
| M. scrofulaceum | U17955 (cluster A), sequences of cluster B genotypes from Swanson et al. (18) |
| M. kansasii | U17947 (subspecies I), sequences of subspecies II, III, IV, and VI from Richter et al. (10) |
| M. gastri | U17931 |
| M. Marinum | U55831, U17949 |
| M. asiaticum | U17921 |
| M. genavense | U17932 |
| M. malmoense | U17948 |
| M. shimoidi | U17956 |
| M. gordonae | U17933, U17934, U17935, U17936, U17938, U17939 |
| M. xenopi | U17959 |
| M. neoaurum | U17950 |
| M. nonchromogenicum | U17951 |
| M. ulcerans | U34034 |
| M. habana | AF129011 |
| M. fortuitum | AF140677, AF140676 |
| M. chelonae | AF071142, AF071141, AF071130 |
| M. smegmetis | AF071138 |
| M. phlei | U17952 |
| M. agri | U17920 |
| M. fallax | U17930 |
| M. rhodesiae | U17954 |
| M. vaccae | U17958 |
| M. chitae | U17929 |
| M. senegalese | AF071137 |
| M. peregenium | AF071136, AF257467 |
| M. mucogenicum | AF071135 |
| M. brumae | AF071129 |
| M. confluentis | AF071132 |
| M. pulveris | U17953 |
| M. abscessus | AF071139, U17927, AF071128 |
| M. terrae | AF257468 |
| M. simiae | AF247570, AF247569 |