Table 3.

APOE differential expression analysis.

Cluster	Cell Type	Fold Change	adj-p-value
2	Astrocytes	−1.49	6.76E-93
16	Endothelial cells	−1.64	1.22E-11
23		−1.53	5.31E-07
1	Excitatory Neurons	−1.23	1.70E-162
13		−1.22	5.33E-23
14		−1.22	3.21E-33
17		−1.21	1.92E-19
21		−1.21	2.67E-19
22		−1.21	8.54E-12
3		−1.79	1.95E-13
7		−1.21	2.53E-59
8		−1.26	2.50E-74
11	Inhibitory Neurons	−1.36	2.14E-39
12		−1.30	3.69E-27
15		−1.47	1.10E-25
18		−1.32	2.40E-17
26		−1.20	0.00050
29		−1.36	0.02576
9		−1.34	5.73E-39
4	Microglia	−2.16	2.53E-76
0	Oligodendrocytes	−1.30	1.18E-128
5		−1.31	7.31E-29
6	OPC	−1.25	4.98E-25
19	VLMC	−1.28	0.03288