Viral/Plasmid DNA
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- Persistent Cas9 activity
- Possible vector integration into host cell DNA (insertional mutagenesis)
- Low frequency of on-target editing
- High frequency of off-target editing
- High cell toxicity
- Difficult production of viral vectors
- Reliance on host cell machinery for transcription/translation
- Host immune response to foreign DNA sequences and viral proteins
- Limited packaging capacities
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Cas9 mRNA and sgRNA
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- Transient Cas9 activity
- No possible vector integration into host cell DNA
- Various delivery methods
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- Low frequency of on-target editing
- High frequency of off-target editing
- High cell toxicity
- Difficult production of Cas9 mRNA and sgRNA
- Reliance on host cell machinery for translation
- Poor stability of mRNA
- Inability to be spatially or temporally regulated
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Cas9/sgRNA RNP
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- Rapid Cas9 activity
- Transient Cas9 activity
- No possible vector integration into host cell DNA
- High frequency of on-target editing
- Low frequency of off-target editing
- Low cell toxicity
- Various delivery methods
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- Difficult production of Cas9 protein and sgRNA
- Immunogenicity to Cas9 protein
- Inability to be spatially or temporally regulated
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