TABLE 1.
Campylobacter jejuni isolate data
| Genotype group | No. | CRU no. | Yr of isolation | Source | Serotypea | Phage type | FAFLP genotypeb |
|---|---|---|---|---|---|---|---|
| Cluster A complex | 1 | NCTC 11168 | 1977 | Human | HS44 | 38 | A-2a |
| 2 | C012487 | 1998 | Chicken portion | HS50 | 35 | A-1a | |
| 3 | C011973 | 1998 | Chicken portion | HS2 | 35 | A-1b | |
| 4 | C011919 | 1998 | Chicken portion | HS2 | 35 | A-1b | |
| 5 | C011848 | 1998 | Chicken portion | HS2 | 35 | A-1c | |
| 6 | C012450 | 1998 | Chicken portion | HS50 | 1 | A-1d | |
| 7 | C013064 | 1998 | Ox liver | HS44 | 33 | A-1e | |
| 8 | C012878 | 1998 | Chicken portion | HS44 | 33 | A-1e | |
| 9 | C012026 | 1998 | Chicken portion | HS44 | 36 | A-1f | |
| 10 | C012025 | 1998 | Chicken portion | HS44 | 36 | A-1f | |
| 11 | C012567 | 1998 | Chicken portion | HS2 | 36 | A-UGc | |
| 12 | C013713 | 1998 | Ox liver | HS2 | 33 | A-2b | |
| 13 | C013082 | 1998 | Chicken portion | HS50 | 15 | A-2c | |
| 14 | C030280 | 1999 | Human | HS16 | 1 | A-3a | |
| 15 | C030328 | 1999 | Human | HS16 | 1 | A-3a | |
| 16 | C031392 | 1999 | Human | HS16 | 6 | A-3b | |
| 17 | C012912 | 1998 | Ox liver | HS50 | 33 | A-4a | |
| 18 | C013606 | 1998 | Wild strain | HS44 | 33 | A-4b | |
| 19 | C028659 | 1999 | Human | HS16 | 5 | A-5a | |
| 20 | C013040 | 1998 | Chicken portion | HS50 | 59 | A-5b | |
| 21 | C028450 | 1999 | Human | HS16 | 5 | A-5c | |
| 22 | C013634 | 1998 | Chicken portion | HS50 | 44 | A-5d | |
| 23 | C011818 | 1998 | Chicken portion | HS50 | 34 | A-5e | |
| 24 | C011856 | 1998 | Chicken portion | HS50 | 5 | A-5e | |
| 25 | C012196 | 1998 | Chicken portion | HS50 | 5 | A-UGc | |
| 26 | C013249 | 1998 | Chicken portion | HS44 | 19 | A-6a | |
| 27 | C011974 | 1998 | Chicken portion | HS44 | 2 | A-6b | |
| 28 | C012154 | 1998 | Chicken portion | HS44 | 2 | A-6b | |
| 29 | C013411 | 1998 | Chicken portion | HS44 | 14 | A-6c | |
| 30 | C026822 | 1999 | Human | HS16 | 2 | A-6d | |
| 31 | C026657 | 1999 | Human | HS16 | 2 | A-6e | |
| Cluster B | 32 | C011993 | 1998 | Chicken portion | HS11 | 44 | B1 |
| 33 | C012240 | 1998 | Chicken portion | HS11 | 44 | B2 | |
| 34 | C012234 | 1998 | Chicken portion | HS11 | 1 | B3 | |
| 35 | C012215 | 1998 | Ox liver | HS11 | 44 | B4 | |
| Cluster C | 36 | C022391 | 1999 | Human | HS18 | 2 | C1 |
| 37 | C022380 | 1999 | Human | HS18 | 2 | C2 | |
| 38 | C023887 | 1999 | Human (Cyprus) | HS18 | 1 | C3 | |
| 39 | C024010 | 1999 | Human (Spain) | HS18 | 1 | C4 | |
| Cluster D | 40 | C012238 | 1998 | Chicken portion | HS11 | 1 | D1 |
| 41 | C013100 | 1998 | Chicken portion | HS11 | 5 | D1 | |
| 42 | C013650 | 1998 | Chicken portion | HS11 | 39 | D1 | |
| 43 | C013431 | 1998 | Chicken portion | HS11 | 62 | D1 | |
| 44 | C013417 | 1998 | Chicken portion | HS11 | UT | D1 | |
| 45 | C012013 | 1998 | Chicken portion | HS11 | 1 | D2 | |
| Cluster E | 46 | C027012 | 1999 | Human | HS18 | 30 | E1 |
| 47 | NCTC 12516 | 1981 | Not known | HS18 | 9 | E2 | |
| Cluster F | 48 | C015168 | 1998 | Human | HS19 | 2 | F1 |
| 49 | C018836 | 1998 | Human GBS | HS19 | 2 | F1 | |
| 50 | C022472 | 1999 | Human | HS19 | 2 | F1 | |
| 51 | C014456 | 1998 | Human | HS19 | 2 | F2 | |
| 52 | C015207 | 1998 | Human | HS19 | 1 | F2 | |
| 53 | C014633 | 1998 | Human | HS19 | 2 | F3 | |
| 54 | C028007 | 1999 | Human | HS19 | 2 | F4 | |
| 55 | NCTC 12517 | 1981 | Not known | HS19 | 2 | F5 | |
| Cluster G | 56 | C027968 | 1999 | Human | HS16 | 20 | G1 |
| 57 | NCTC 12549 | 1982 | Not known | HS44 | 51 | G2 | |
| 58 | C011921 | 1998 | Chicken portion | HS50 | 6 | G3 | |
| 59 | C001126 | 1996 | Unpasteurized milk | HS50 | 6 | G4 | |
| Cluster H | 60 | C005281 | 1997 | Human | HS6 | 2 | H1 |
| 61 | C005477 | 1997 | Human | HS6 | 2 | H1 | |
| 62 | C026868 | 1999 | Human | HS6 | 39 | H2 | |
| 63 | NCTC 12505 | 1982 | Not known | HS6 | 2 | H3 | |
| 64 | C027635 | 1999 | Human | HS6 | 2 | H4 | |
| Unclustered (UG)d | 65 | NCTC 12504 | 1982 | Not known | HS5 | 5 | UG1 |
| 66 | C011986 | 1998 | Chicken portion | HS50 | 49 | UG2 | |
| 67 | C013423 | 1998 | Chicken portion | HS5 | 44 | UG3 | |
| 68 | NCTC 12559 | Not known | Not known | HS50 | 6 | UG4 | |
| 69 | C028937 | 1999 | Human | HS16 | 6 | UG5 | |
| 70 | C012938 | 1998 | Human | HS16 | 20 | UG6 | |
| 71 | C011839 | 1998 | Chicken portion | HS50 | 5 | UG7 | |
| 72 | C012483 | 1998 | Chicken portion | HS50 | 1 | UG8 | |
| 73 | C013039 | 1998 | Chicken portion | HS50 | 2 | UG9 | |
| 74 | C013073 | 1998 | Chicken portion | HS5 | 48 | UG10 | |
| 75e | C012586 | 1998 | Chicken portion | HS UT | UT | UG11 |
a
Serotype of isolates as determined by direct agglutination method (see Materials and Methods).
b
FAFLP genotypes were designated following cluster analysis (see Fig. 2) as cluster B to H followed by clone number or, for cluster A complex, as clusters A-1 to A-6 followed by clone type (designated by letters a to f).
c
A-UG designated to a characterized FAFLP genotype which is unclustered within the cluster A complex.
d
UG designated to a characterized FAFLP genotype which is unclustered within this study.
e
Indicates the C. coli strain, which exhibited a diverse and unclustered genotype.