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. 2022 Feb 11;12(2):e054541. doi: 10.1136/bmjopen-2021-054541

Table 3.

Microbiological diagnostics and culture and sensitivity results

Variable n (%)
Sample collected for microbiological workup, n=870 patients*
 Yes 119 (13.6)
 No 693 (79.7)
 Unknown 58 (6.7)
Specimen type, n=119 patients
 Blood 53 (44.5)
 Urine 26 (21.9)
 Cerebrospinal fluid 13 (10.9)
 Pus 11 (9.2)
 Blood and urine 8 (6.7)
 Blood and cerebrospinal fluid 6 (5.1)
 Peritoneal fluid 2 (1.7)
Culture result, n=119 patients
 Positive 38 (31.9)
 Negative 29 (24.4)
 Unknown 52 (43.7)
Isolated microorganism, n=41
 Gram positive bacteria 13 (31.7)
 Gram negative bacteria 28 (68.3)
Type of isolated bacteria, n=41†
Escherichia coli 8 (19.5)
Klebsiella pneumoniae 7 (17.1)
Klebsiella oxytoca 4 (9.8)
Acinetobacter 4 (9.8)
Staphylococcus aureus 4 (9.8)
Enterobacter aerogenes 3 (7.3)
Enterococcus 3 (7.3)
Coagulase negative staphylococcus, contaminant 3 (7.3)
 Others‡ 5 (12.2)
Resistant phenotype, n=21
 Third-generation cephalosporin resistant Enterobacteriaceae 13 (61.9)
 Methicillin resistant Staphylococcus aureus 3 (14.3)
 Carbapenem resistant Enterobacteriaceae 3 (14.3)
 Carbapenem resistant Pseudomonas aeruginosa 1 (4.8)
 Carbapenem resistant Acinetobacter 1 (4.8)

*Only for those whose indication type is for healthcare-associated infection and community-acquired infection.

†For one patient Klebsiella oxytoca from blood and Klebsiella pneumoniae from urine, from another patient streptococcus from blood and Klebsiella pneumoniae from blood and another one Klebsiella pneumoniae from urine and Acinetobacter from blood were isolated.

Pseudomonas aeruginosa, Citrobacter, Gram positive cocci, Group A streptococcus, Group D streptococcus.