Table 1. Top 25 prioritized candidate causal genes for CAD identified using our IGA pipeline with either UKBB1 with STARNET,12 or, CARDIoGRAMplusC4D2 with STARNET.12.
Candidate casual CAD gene |
Most significant P value |
Tissue with most significant P value |
GWAS used in IGA with most significant P value (UKBB or CaridoG) |
Causal in that tissue in UKBB, CaridoG, or Both |
---|---|---|---|---|
CDKN2B | 2.16x10−47 | AOR | UKBB | Both |
PHACTR1 | 3.65x10−42 | MAM | CardioG | Both |
TBC1D7 | 2.40x10−39 | MAM | CardioG | Both |
GFOD1 | 2.64x10−34 | MAM | CardioG | Both |
PSRC1 | 3.40x10−24 | BLOOD | UKBB | Both |
SORT1 | 1.18x10−23 | LIV | UKBB | Both |
CELSR2 | 5.19x10−23 | LIV | UKBB | Both |
MRPS6 | 1.96x10−22 | AOR | UKBB | Both |
SLC5A3 | 1.96x10−22 | AOR | UKBB | Both |
SARS | 2.42x10−20 | LIV | UKBB | Both |
KCNE2 | 8.19x10−20 | AOR | UKBB | CardioG |
NBEAL1 | 4.04x10−18 | AOR | UKBB | Both |
ICA1L | 1.08x10−17 | AOR | UKBB | Both |
CARF | 1.79x10−17 | MP | UKBB | Both |
LIPA | 1.58x10−15 | LIV | UKBB | Both |
GGCX | 3.94x10−13 | SF | UKBB | Both |
TWIST1 | 3.97x10−13 | AOR | UKBB | Both |
VAMP5 | 1.11x10−12 | MP | UKBB | Both |
VAMP8 | 1.13x10−12 | FC | UKBB | CardioG |
FES | 1.39x10−12 | VAF | UKBB | Both |
MIA3 | 2.56x10−12 | FC | UKBB | Both |
KIAA1462 | 5.86x10−12 | MAM | UKBB | Both |
PDGFD | 6.28x10−12 | MAM | UKBB | Both |
FURIN | 1.07x10−11 | AOR | UKBB | Both |
MAT2A | 2.33x10−11 | AOR | UKBB | Both |