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. Author manuscript; available in PMC: 2023 Feb 1.
Published in final edited form as: Circ Genom Precis Med. 2021 Dec 28;15(1):e003365. doi: 10.1161/CIRCGEN.121.003365

Table 1. Top 25 prioritized candidate causal genes for CAD identified using our IGA pipeline with either UKBB1 with STARNET,12 or, CARDIoGRAMplusC4D2 with STARNET.12.

Candidate causal genes were prioritized based on the smallest P value for the class 1 analyses (MetaXcan or SMR), however, for all of these top 25 candidate causal genes the most significant P value was obtained with MetaXcan (as opposed to SMR). Full results for all 162 candidate causal genes are in Supplemental Table VII.

Candidate
casual
CAD gene
Most
significant
P value
Tissue with
most significant
P value
GWAS used in IGA
with most significant P
value (UKBB or
CaridoG)
Causal in that
tissue in UKBB,
CaridoG, or Both
CDKN2B 2.16x10−47 AOR UKBB Both
PHACTR1 3.65x10−42 MAM CardioG Both
TBC1D7 2.40x10−39 MAM CardioG Both
GFOD1 2.64x10−34 MAM CardioG Both
PSRC1 3.40x10−24 BLOOD UKBB Both
SORT1 1.18x10−23 LIV UKBB Both
CELSR2 5.19x10−23 LIV UKBB Both
MRPS6 1.96x10−22 AOR UKBB Both
SLC5A3 1.96x10−22 AOR UKBB Both
SARS 2.42x10−20 LIV UKBB Both
KCNE2 8.19x10−20 AOR UKBB CardioG
NBEAL1 4.04x10−18 AOR UKBB Both
ICA1L 1.08x10−17 AOR UKBB Both
CARF 1.79x10−17 MP UKBB Both
LIPA 1.58x10−15 LIV UKBB Both
GGCX 3.94x10−13 SF UKBB Both
TWIST1 3.97x10−13 AOR UKBB Both
VAMP5 1.11x10−12 MP UKBB Both
VAMP8 1.13x10−12 FC UKBB CardioG
FES 1.39x10−12 VAF UKBB Both
MIA3 2.56x10−12 FC UKBB Both
KIAA1462 5.86x10−12 MAM UKBB Both
PDGFD 6.28x10−12 MAM UKBB Both
FURIN 1.07x10−11 AOR UKBB Both
MAT2A 2.33x10−11 AOR UKBB Both