Table 2.
Features | ARS-UI_Ramb_v2.0 | Oar_rambouillet_v1.0 | Oar_v4.0 | Description |
---|---|---|---|---|
LOW_COV_PE | 7212 | 95166 | 89103 | Low read coverage areas |
LOW_NORM_COV_PE | 2990 | 24381 | 26860 | Low coverage of normal paired end reads |
HIGH_SPAN_PE | 6522 | 22628 | 33232 | Regions with high numbers of inter-contig paired end reads |
HIGH_COV_PE | 2051 | 3630 | 26276 | Regions with high read coverage |
HIGH_NORM_COV_PE | 2366 | 2633 | 1875 | Regions with high coverage of normal paired end reads |
HIGH_OUTIE_PE | 2514 | 28766 | 37495 | Regions with high counts of improperly paired reads |
HIGH_SINGLE_PE | 0 | 0 | 0 | Regions with high counts of single unmapped reads |
STRECH_PE | 74 | 84 | 67 | Regions with high Comp/Expansion (CE) statistics |
COMPR_PE | 87 | 92 | 44 | Regions with low Comp/Expansion (CE) statistics |