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. Author manuscript; available in PMC: 2022 Feb 16.
Published in final edited form as: Nat Chem. 2020 Oct 12;12(11):1029–1034. doi: 10.1038/s41557-020-00559-0

Fig. 2 |. Predicted effects of thioester charge on phospholipid synthesis.

Fig. 2 |

a, Energetics from B3LYP-D3 density functional theory calculations on transacylation reactions. Tetrahedral intermediates iNt1 and iNt2 resemble the transition states of the corresponding addition steps. iNt1 is destabilized by over 7 kcal mol−1 compared with iNt2. b, Optimized structures of reaction intermediates. The negatively charged sulfonate group of iNt1 is distal from the phosphate group to avoid a disfavoured charge repulsion interaction, whereas the positively charged side chain of iNt2 moves into a geometry that will increase the favorable interaction with the phosphate group to stabilize the tetrahedral intermediate. Distances are shown in ångströms.