Table 3. Total wall clock time (in hours) that each tool required for scaffolding the Arabidopsis and human assemblies with 30x coverage by long reads on a 24-core Intel(R) Xeon(R) 6248R server with 512 GB of RAM.

In parentheses we list the time required for the alignment of the long reads for SAMBA and LRScaf.

	SAMBA	LRScaf	LINKS	SMIS
A. thaliana	0.6(0.07)	0.1(0.07)	10	28
Human (CHM13)	12(9)	9(8.9)	--	--