Table 1.

Output statistics of RNA-seq samples.

Samples	Raw reads	Raw bases	Valid reads	Valid bases	Valid %	Q20 %	Q30 %	GC %
ND-4W-1	53,297,720	7.99G	52,242,194	7.66G	98.02	98.29	95.38	49.78
ND-4W-2	54,833,870	8.23G	53,715,812	7.91G	97.96	98.80	96.47	48.66
ND-4W-3	49,358,704	7.40G	48,507,944	7.13G	98.28	98.33	95.53	50.25
ND-8W-1	57,988,636	8.70G	57,006,612	8.38G	98.31	98.46	95.75	50.11
ND-8W-2	55,105,796	8.27G	54,124,926	7.95G	98.22	98.40	95.62	50.60
ND-8W-3	45,585,784	6.84G	45,132,700	6.66G	99.01	98.60	96.11	49.99
ND-16W-1	42,627,452	6.01G	42,189,834	5.90G	98.97	98.32	94.52	49.77
ND-16W-2	44,687,954	6.30G	44,264,266	6.20G	99.05	98.36	94.54	49.16
ND-16W-3	50,558,066	7.13G	50,041,154	7.00G	98.98	98.33	94.50	49.72
HFD-4W-1	53,297,720	7.99G	52,242,194	7.66G	98.02	98.29	95.38	49.78
HFD-4W-2	54,833,870	8.23G	53,715,812	7.91G	97.96	98.80	96.47	48.66
HFD-4W-3	49,358,704	7.40G	48,507,944	7.13G	98.28	98.33	95.53	50.25
HFD-8W-1	55,828,734	8.37G	55,045,872	8.12G	98.60	98.65	96.24	50.45
HFD-8W-2	56,242,448	8.44G	55,325,602	8.14G	98.37	98.43	95.71	50.98
HFD-8W-3	45,327,538	6.80G	44,238,078	6.50G	97.60	98.59	95.97	49.43
HFD-16W-1	54,117,976	8.12G	53,161,316	7.80G	98.23	98.34	95.49	51.30
HFD-16W-2	54,947,604	8.24G	54,213,726	7.99G	98.66	98.65	96.23	51.52
HFD-16W-3	46,836,032	7.03G	45,824,512	6.74G	97.84	98.70	96.20	50.16