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. Author manuscript; available in PMC: 2022 Aug 1.
Published in final edited form as: Nat Protoc. 2022 Jan 10;17(2):282–326. doi: 10.1038/s41596-021-00641-y

Fig. 4 |. Identification of DENV antigen spatial patterns.

Fig. 4 |

a, The QHGTI epitope was selected and colored red to illustrate the distribution of these epitopes on the dengue viral particle. b, Surface accessible epitopes on one face of the viral particle were selected and colored based on the specific patterns that were observed to cluster into trimers or pentamers7. c, The specific cluster patterns of epitope arrangement were determined by measuring the distance between the Cα of G in the QHGTI motif on neighboring epitopes (triangular clusters were colored in cyan and pentagonal clusters colored in red). d, The atomic distances that defines the arrangement of epitopes as measured in PyMol. a and b adapted with permission from ref.7, Springer Nature Ltd.