Antibodies |
chicken anti-GFP |
Aves |
GFP-1020, RRID:AB_10000240 |
goat anti-ChAT |
Millipore |
AB144p, RRID:AB_2079751 |
rabbit anti-GFP |
Invitrogen |
A11122, RRID:AB_221569 |
rabbit anti-phox2b |
Jean-François Brunet lab |
N/A |
mouse anti-phox2b |
Santa Cruz Biotechnology |
B-11, sc-376997, RRID:AB_2813765 |
rat anti-RFP |
Chromotek |
5F8, RRID:AB_2336064 |
donkey anti-chicken 488 |
Jackson ImmunoResearch |
703-545-155, RRID:AB_2340375 |
donkey anti-chicken Cy5 |
Jackson ImmunoResearch |
703-175-155, RRID:AB_2340365 |
donkey anti-goat Cy5 |
Jackson ImmunoResearch |
705-606-147, RRID:AB_2340438 |
donkey anti-rabbit 488 |
Jackson ImmunoResearch |
711-545-152, RRID:AB_2313584 |
donkey anti-rabbit Cy5 |
Jackson ImmunoResearch |
712-165-153, RRID:AB_10895300 |
donkey anti-rat Cy3 |
Jackson ImmunoResearch |
711-495-152, RRID:AB_92645 |
goat anti-mouse Alexa Fluor 647 |
Invitrogen |
21236, RRID:AB_2535805 |
Bacterial and virus strains |
oG SiR G-Deleted Rabies-FlpO-mCherry |
The Viral Vector Core at the Salk Institute for Biological Sciences |
N/A |
G-Deleted Rabies-eGFP |
Janelia Viral Tools |
N/A |
G-Deleted Rabies-mCherry |
Janelia Viral Tools |
N/A |
HSV-hEF1a-Rabies G |
Gene Delivery Technology Core Massachusetts General Hospital |
RN700 |
HSV-hCMV-YTB |
Gene Delivery Technology Core Massachusetts General Hospital |
N/A |
Chemicals, peptides, and recombinant proteins |
Carbenoxolone |
Sigma-Aldrich |
C4790 |
18ß-glycyrrhetinic acid |
Sigma-Aldrich |
G10105 |
Meclofenamic acid |
Fisher Scientific |
AAJ6048403 |
Tetrodotoxin |
Abcam |
ab120054 |
Substance P |
Abcam |
ab120170 |
DAMGO |
Abcam |
ab120674 |
Nifedipine |
Tocris |
1075 |
Bay K8644 |
Tocris |
154410 |
Veratridine |
Abcam |
ab120279 |
ZD7288 |
Abcam |
ab120102 |
Riluzole |
Abcam |
ab120272 |
Mibefradil |
Tocris |
219810 |
Iberiotoxin |
Alomone Labs |
STI-400 |
UCL1684 |
Tocris |
13105 |
QX314 chloride |
Tocris |
2313 |
NBQX |
Abcam |
ab120046 |
CNQX |
Abcam |
ab120044 |
D-APV |
Alomone Labs |
D-145 |
Picrotoxin |
Abcam |
ab120315 |
Strychnine |
Sigma Aldrich |
S0532 |
Cholera Toxin Subunit B, Alexa Fluor™ 555 Conjugate |
Life Technologies |
C34776 |
Experimental models: organisms/strains |
Mouse: C57Bl/6J |
The Jackson Laboratory |
JAX: 000664 |
Mouse: Snap25-GCaMP6s (Snap25tm3.1Hze) |
The Jackson Laboratory |
JAX: 025111 |
Mouse: Slc17a6-Cre |
The Jackson Laboratory |
JAX: 016963 |
Mouse: Gad2-Cre |
The Jackson Laboratory |
JAX: 010802 |
Mouse: Slc32a1-Cre |
The Jackson Laboratory |
Jax: 028862 |
Mouse: Slc6a5-Cre |
Sherman et al. 2015
|
N/A |
Mouse: RIKEN-Slc6a5-Cre |
RIKEN BRC |
RBRC: 10109 |
Mouse: Dbx1-Cre |
Bielle et al. 2005
|
N/A |
Mouse: Foxp2-Cre |
The Jackson Laboratory |
JAX: 030541 |
Mouse: Chat-Cre |
The Jackson Laboratory |
JAX: 006410 |
Mouse: Egr2-Cre |
The Jackson Laboratory |
JAX: 025744 |
Mouse: Neurod6-Cre |
Schwab et al. 2000
|
N/A |
Mouse: Penk-Cre |
The Jackson Laboratory |
JAX: 025112 |
Mouse: Parv-Cre |
The Jackson Laboratory |
JAX: 017320 |
Mouse: Tac1-Cre |
The Jackson Laboratory |
JAX: 021877 |
Mouse: Npy-Cre |
The Jackson Laboratory |
JAX: 027851 |
Mouse: ROSA-LSL-G-TVA (Gt(ROSA)26Sortm1(CAG-RABVgp4,-TVA)Arenk) |
The Jackson Laboratory |
JAX: 024708 |
Mouse: ROSA-LSL-GCaMP6s (Ai96) |
The Jackson Laboratory |
JAX: 028866 |
Mouse: ROSA-LSL-GCaMP6f (Ai95) |
The Jackson Laboratory |
JAX: 028865 |
Mouse: ROSA-LSL-EYFP |
The Jackson Laboratory |
JAX: 006148 |
Mouse: Slc17a6-Flp0 |
The Jackson Laboratory |
JAX: 030212 |
R26 LSL FSF ReaChR-mCitrine |
The Jackson Laboratory |
JAX: 024846 |
RC::FLTG |
The Jackson Laboratory |
JAX: 026932 |
Software and algorithms |
Matlab |
MathWorks |
|
Whistles |
Holy and Guo, 2005
|
|
Custom Matlab code |
Yackle Lab |
DOI: 10.5281/zenodo.5765668
|
Other |
M.O.M.® (Mouse on Mouse) Blocking Reagent |
Vector Laboratories |
MKB-2213-1 |