Table 1.
Genes predicted in the chloroplast genome of O. gaubae
| Category of genes | Group of genes | Name of genes |
|---|---|---|
| Self-replication | Large subunit of ribosomal proteins | rpl14, rpl16*, rpl2*, rpl20, rpl23, rpl32, rpl33, rpl36 |
| Small subunit of ribosomal proteins | rps2, rps3, rps4, rps7, rps8, rps11, rps12*, rps14, rps15, rps18, rps19 | |
| DNA-dependent RNA polymerase | rpoA, rpoB, rpoC1*, rpoC2 | |
| Ribosomal RNA genes | rrn16S, rrn23S, rrn 4.5S, rrn 5S | |
| Transfer RNA genes | 30 trn genes (5 contain an intron) | |
| Genes for photosynthesis | Subunits of NADH-dehydrogenase | ndhA*, ndhB*, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| Subunits of photosystem I | psaA, psaB, psaC, psaI, psaJ | |
| Subunits of photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | |
| Subunits of cytochrome b/f complex | petA, petB*, petD*, petG, petL, petN | |
| Subunits of ATP synthase | atpA, atpB, atpE, atpF*, atpH, atpI | |
| Subunit of rubisco | rbcL | |
| Other genes | Maturase K | matK |
| Envelope membrane protein | cemA | |
| Subunit of Acetyl-CoA-carboxylase | accD | |
| C-type cytochrome synthesis gene | ccsA | |
| Protease | clpP* | |
| Genes of unkown function | Conserved hypothetical chloroplast open reading frames | ycf1, ycf2, ycf4, ycf3** |
The number of asterisks after the gene names indicates the number of introns contained in the genes