TABLE 1.
Coding of the design matrix for bi-allelic single nucleotide polymorphisms (A or B alleles) in a polysomic tetraploid potato considering pseudo-diploid (A), additive tetrasomic polyploid genotypes (B), and full tetraploids including non-additive effects (after Slater et al., 2016).
| Genotype | Pseudo-diploid (A) | Additive tetrasomic polyploid (B) | Full tetraploid including non-additive effects (C) | ||||
| Marker effects # | 1 | 1 | 1 | 2 | 3 | 4 | 5 |
| AAAA | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| AAAB | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
| AABB | 1 | 2 | 0 | 0 | 1 | 0 | 0 |
| ABBB | 1 | 3 | 0 | 0 | 0 | 1 | 0 |
| BBBB | 2 | 4 | 0 | 0 | 0 | 0 | 1 |