. Author manuscript; available in PMC: 2022 Feb 21.

Published in final edited form as: Sci Transl Med. 2021 Sep 22;13(612):eabg3459. doi: 10.1126/scitranslmed.abg3459

Table 1.

primer sequences

qRT-PCR primers
BDNF (human)	GACTTCGGGAAGGTGTCTGG; ACAGGATGGGCAGAAGGTTG
ChgA (mouse)	AAGGTGATGAAGTGCGTCCTGGAA; AGCAGATTCTGGTGTCGCAGGATA
cKit (mouse)	CCTCTGGGAGCTCTTCTCCT; TGTTGGCCTTTTCAAGGGGT
Il6 (mouse/rat)	CCAATTTCCAATGCTCTCCT; ACCACAGTGAGGAATGTCCA
IL6 (human)	TCTCCACAAGCGCCTTCG; CTCAGGGCTGAGATGCCG
iNOS (mouse)	CTGCTGGTGGTGACAAGCACATTT; ATGTCATGAGCAAAGGCGCAGAAC
Ki67 (mouse)	CCAAGGCCCAAGTTTGATGC; GACTTGGCCCCGAGATGTAG
Lgr5 (mouse)	TGAGCGGGACCTTGAAGATTTCCT; TACCAAATAGGTGCTCACAGGGCT
Lyz1 (mouse)	AAGCTGGCTGACTGGGTGTGTTTA; CACTGCAATTGATCCCACAGGCAT
Muc2 (mouse)	TAGTGGAGATTGTGCCGCTGAAGT; AGAGCCCATCGAAGGTGACAAAGT
p75NTR	CCGCTGACAACCTCATTCCT; TGCTTGCAGCTGTTCCATCT
Tnf-α (mouse)	TTCCGAATTCACTGGAGCCTCGAA; TGCACCTCAGGGAAGAATCTGGAA
Tnf-α (pig)	GCCCTTCCACCAACGTTTTC; TCTGGCAAGGGCTCTTGATG
TNF-α (human)	GGCGTGGAGCTGAGAGATAAC; GGTGTGGGTGAGGAGCACAT
Tlr4 (k/d rat)	TGTTGGATGGAAAAGCCTTG; GTTCTCACTGGGCCTTAGCC
Tlr4 (k/o mouse)	CAGCAAAGTCCCTGATGAC; TCCAGCCACTGAAGTTCTGA
Tomato (Td-Tomato reporter mouse)	CACCATCGTGGAACAGTACG; GCGCATGAACTCTTTGATGA
Rplp0	GGCGACCTGGAAGTCCAACT; CCATCAGCACCACAGCCTTC
Vil1 (mouse)	AAATTGCAGCCTCGGCGTATCAAG; GGCACAGGCTCCAAGTTGTTCTTT
*Genotyping primers*
Bdnf^2lox mouse	TGTGATTGTGTT TCTGGTGAC; GCCTTCATGCAACCGAAGTATG
Bdnf^mutant mouse	ATGAAAGAAGTAAACGTCCAC; CCAGCAGAAAGA GTAGAGGAG; GGGAACTTCCTGACTAGGGG
Cre-transgenic mouse	GTTCGCAAGAACCTGATGGACA; CTAGAGCCTGTTTTGCACGTTC
ROSA26 ^iDTR	CATCAAGGAAACCCTGGACTACTG; AAAGTCGCTCTGAGTTGTTAT; GGAGCGGGAGAAATGGATATG
ROSA26 ^tdTomato	CTGTTCCTGTACGGCATGG; GGCATTAAAGCAGCGTATCC; AAGGGAGCTGCAGTGGAGTA; CCGAAAATCTGTGGGAAGTC
Tlr4^loxp mouse	CAAGGATCCGATGATGAGTACC; CTGGGATCAGAGGCTGTCTTATAG