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. 2022 Jan 20;50(3):1734–1752. doi: 10.1093/nar/gkac022

Figure 1.

Figure 1.

tRNAs are processed by Dicer into tsRNA. (A) Box plots showing the log2 fold change of various tsRNA types, miRNA and snoRNA upon Dicer knockdown. (B) Box plots showing Dicer dependent tsRNA derived from various tRNA isotypes (C). Bar charts representing the length distribution of various tsRNA types based on sequence length, in nucleotides (nt). (D). Images of northern blot showing signals of tRNA and corresponding tRFs for Pro, and Ala in wild type HEK293T and an inducible Dicer knockdown (shDicer) cell line. (E) Stem loop qRT-PCR showing levels of selected tsRNAs and miRNAs fragments isolated from wt and Dicer KD cells. The values are derived from three biological repeats and each in the bar chart corresponds to average value of two technical repeats. (F) Northern blot images showing signals of tRNAPro and its corresponding tsRNA (tRF-3Pro), and tRNAAla at different time points after the addition of FLAG-tagged Dicer or TAP-tagged Dicer.