TABLE 1.
Species name | Total length (bp) | LSC (bp) | SSC (bp) | IR (bp) | Total GC content (%) | Total no. of tRNA | Total no. of rRNA | Total no. of genes |
Dischidia australis | 176,733 | 91,267 | 2,298 | 41,584 | 37.1 | 38 (8) | 8 (4) | 143 (113) |
Dischidia griffithii | 176,733 | 91,267 | 2,298 | 41,584 | 37.0 | 38 (8) | 8 (4) | 143 (113) |
Dischidia nummularia | 175,529 | 90,407 | 2,292 | 41,415 | 38.6 | 38 (8) | 8 (4) | 143 (114) |
Dischidia ruscifolia | 175,887 | 90,945 | 2,298 | 41,322 | 37.1 | 38 (8) | 8 (4) | 143 (113) |
Hoya angustifolia | 175,940 | 90,482 | 2,294 | 41,582 | 38.8 | 38 (8) | 8 (4) | 142 (113) |
Hoya ariadna | 179,056 | 92,383 | 2,293 | 42,190 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya caudate | 176,887 | 91,553 | 2,306 | 41,514 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya chinghungensis | 176,221 | 90,614 | 2,297 | 41,655 | 38.7 | 38 (8) | 8 (4) | 142 (114) |
Hoya commutate | 176,458 | 91,191 | 2,293 | 41,487 | 38.7 | 38 (8) | 8 (4) | 142 (114) |
Hoya dimorpha | 177,575 | 91,824 | 2,303 | 41,724 | 37.1 | 38 (8) | 8 (4) | 143 (113) |
Hoya griffithii | 177,132 | 91,278 | 2,288 | 41,783 | 38.7 | 38 (8) | 8 (4) | 143 (113) |
Hoya kerrii | 176,967 | 91,514 | 2,285 | 41,584 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya lacunose | 175,404 | 90,038 | 2,294 | 41,536 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya lanceolata subs. bella | 176,739 | 90,927 | 2,304 | 41,754 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya liangii | 177,005 | 91,249 | 2,288 | 41,734 | 36.9 | 38 (8) | 8 (4) | 143 (113) |
Hoya longifolia | 177,990 | 91,318 | 2,288 | 41,692 | 37.1 | 38 (8) | 8 (4) | 142 (114) |
Hoya meliflua subs. fraterna | 177,130 | 91,658 | 2,302 | 41,585 | 36.9 | 38 (8) | 8 (4) | 142 (114) |
Hoya ovalifolia | 176,757 | 91,330 | 2,297 | 41,565 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya pandurate | 176,320 | 90,889 | 2,265 | 41,583 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya pottsii | 175,818 | 90,468 | 2,294 | 41,528 | 38.6 | 38 (8) | 8 (4) | 142 (114) |
Hoya pubicalyx | 176,829 | 91,376 | 2,285 | 41,584 | 36.9 | 38 (8) | 8 (4) | 142 (114) |
Hoya radicalis | 177,347 | 91,218 | 2,293 | 41,918 | 37 | 38 (8) | 8 (4) | 142 (114) |
Hoya rigida | 176,474 | 91,026 | 2,288 | 41,580 | 37 | 38 (8) | 8 (4) | 143 (113) |
Hoya sylvatica | 175,950 | 90,468 | 2,294 | 41,594 | 37 | 38 (8) | 8 (4) | 142 (114) |
Hoya sp. 11 ZCF6107 | 175,905 | 90,489 | 2,294 | 41,561 | 37 | 38 (8) | 8 (4) | 142 (114) |
Hoya sp. 2 ZCF6006 | 178,241 | 92,072 | 2,305 | 41,932 | 37 | 38 (8) | 8 (4) | 143 (113) |
Hoya sp. 3 ZCF6076 | 177,781 | 91,192 | 2,297 | 42,146 | 37.1 | 38 (8) | 8 (4) | 142 (114) |
Hoya sp. 4 ZCF6004 | 178,838 | 92,175 | 2,295 | 42,184 | 37 | 38 (8) | 8 (4) | 143 (113) |
Hoya sp. 8 ZCF6076 | 177,198 | 91,618 | 2,294 | 41,643 | 37 | 38 (8) | 8 (4) | 143 (113) |
Hoya thomsonii | 161,420 | 80,795 | 2,289 | 39,168 | 37 | 38 (8) | 8 (4) | 143 (113) |
Hoya volubilis | 176,525 | 91,749 | 2,294 | 41,241 | 37.1 | 38 (8) | 8 (4) | 142 (113) |
The standard gene number in Hoya is 143, 113–114 genes were unique, and 17 genes were duplicated in the two IRs (Table 1). ycf15 gene is missing in three of the Dischidia species and ten species of Hoya. All chloroplast genomes include 79–80 protein-coding genes, 30 tRNA genes, and four rRNAs; the IR regions comprise 29 genes (17 protein-coding, 8 tRNA, and 4 rRNA genes).