Skip to main content
. 2022 Feb 8;12:814833. doi: 10.3389/fpls.2021.814833

TABLE 1.

Summary of 31 Hoya plastome features that were assembled and annotated.

Species name Total length (bp) LSC (bp) SSC (bp) IR (bp) Total GC content (%) Total no. of tRNA Total no. of rRNA Total no. of genes
Dischidia australis 176,733 91,267 2,298 41,584 37.1 38 (8) 8 (4) 143 (113)
Dischidia griffithii 176,733 91,267 2,298 41,584 37.0 38 (8) 8 (4) 143 (113)
Dischidia nummularia 175,529 90,407 2,292 41,415 38.6 38 (8) 8 (4) 143 (114)
Dischidia ruscifolia 175,887 90,945 2,298 41,322 37.1 38 (8) 8 (4) 143 (113)
Hoya angustifolia 175,940 90,482 2,294 41,582 38.8 38 (8) 8 (4) 142 (113)
Hoya ariadna 179,056 92,383 2,293 42,190 38.6 38 (8) 8 (4) 142 (114)
Hoya caudate 176,887 91,553 2,306 41,514 38.6 38 (8) 8 (4) 142 (114)
Hoya chinghungensis 176,221 90,614 2,297 41,655 38.7 38 (8) 8 (4) 142 (114)
Hoya commutate 176,458 91,191 2,293 41,487 38.7 38 (8) 8 (4) 142 (114)
Hoya dimorpha 177,575 91,824 2,303 41,724 37.1 38 (8) 8 (4) 143 (113)
Hoya griffithii 177,132 91,278 2,288 41,783 38.7 38 (8) 8 (4) 143 (113)
Hoya kerrii 176,967 91,514 2,285 41,584 38.6 38 (8) 8 (4) 142 (114)
Hoya lacunose 175,404 90,038 2,294 41,536 38.6 38 (8) 8 (4) 142 (114)
Hoya lanceolata subs. bella 176,739 90,927 2,304 41,754 38.6 38 (8) 8 (4) 142 (114)
Hoya liangii 177,005 91,249 2,288 41,734 36.9 38 (8) 8 (4) 143 (113)
Hoya longifolia 177,990 91,318 2,288 41,692 37.1 38 (8) 8 (4) 142 (114)
Hoya meliflua subs. fraterna 177,130 91,658 2,302 41,585 36.9 38 (8) 8 (4) 142 (114)
Hoya ovalifolia 176,757 91,330 2,297 41,565 38.6 38 (8) 8 (4) 142 (114)
Hoya pandurate 176,320 90,889 2,265 41,583 38.6 38 (8) 8 (4) 142 (114)
Hoya pottsii 175,818 90,468 2,294 41,528 38.6 38 (8) 8 (4) 142 (114)
Hoya pubicalyx 176,829 91,376 2,285 41,584 36.9 38 (8) 8 (4) 142 (114)
Hoya radicalis 177,347 91,218 2,293 41,918 37 38 (8) 8 (4) 142 (114)
Hoya rigida 176,474 91,026 2,288 41,580 37 38 (8) 8 (4) 143 (113)
Hoya sylvatica 175,950 90,468 2,294 41,594 37 38 (8) 8 (4) 142 (114)
Hoya sp. 11 ZCF6107 175,905 90,489 2,294 41,561 37 38 (8) 8 (4) 142 (114)
Hoya sp. 2 ZCF6006 178,241 92,072 2,305 41,932 37 38 (8) 8 (4) 143 (113)
Hoya sp. 3 ZCF6076 177,781 91,192 2,297 42,146 37.1 38 (8) 8 (4) 142 (114)
Hoya sp. 4 ZCF6004 178,838 92,175 2,295 42,184 37 38 (8) 8 (4) 143 (113)
Hoya sp. 8 ZCF6076 177,198 91,618 2,294 41,643 37 38 (8) 8 (4) 143 (113)
Hoya thomsonii 161,420 80,795 2,289 39,168 37 38 (8) 8 (4) 143 (113)
Hoya volubilis 176,525 91,749 2,294 41,241 37.1 38 (8) 8 (4) 142 (113)

The standard gene number in Hoya is 143, 113–114 genes were unique, and 17 genes were duplicated in the two IRs (Table 1). ycf15 gene is missing in three of the Dischidia species and ten species of Hoya. All chloroplast genomes include 79–80 protein-coding genes, 30 tRNA genes, and four rRNAs; the IR regions comprise 29 genes (17 protein-coding, 8 tRNA, and 4 rRNA genes).