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. 2021 Sep 9;31(4):491–498. doi: 10.1093/hmg/ddab266

Table 1.

Cas9 sgRNA spacer sequences and ssDNA donor template sequences used for genomic editing of HepG2 cells

rs2289669 G-to-A substitution
Cas9 sgRNA spacer sequence 5’-CGGGAACTCCCACGCTACTG-3’
ssDNA donor template sequence 5’-AGTTTGTGCTAAGCATCGTAACCTGGGGCTCAGTTTCCACAGTAGCGTGGAAGTTCCCGGCTAGACAAAGGGGATGTTGCAAATCAGTCTTTTCAAAACT-3’
rs2289669 A-to-G substitution
Cas9 sgRNA spacer sequence 5’-CGGGAACTTCCACGCTACTG-3’
ssDNA donor template sequence 5’-AGTTTGTGCTAAGCATCGTAACCTGGGGCTCAGTTTCCACAGTAGCGTGGGAGTTCCCGGCTAGACAAAGGGGATGTTGCAAATCAGTCTTTTCAAAACT-3’
rs8065082 C-to-T substitution
Cas9 sgRNA spacer sequence 5’-TTAGTATCGGCCAAAGTGCC-3’
ssDNA donor template sequence 5’-TATTTTGTTTCCAGTGATAAGAATCCTCTTGGTTTCTTAGTATTGGCCAAAGTGCCCGGTTTGTAGTAGTTGCATAATATGTTT-3’
rs8065082 T-to-C substitution
Cas9 sgRNA spacer sequence 5’-TTAGTATTGGCCAAAGTGCC-3’
ssDNA donor template sequence 5’-TATTTTGTTTCCAGTGATAAGAATCCTCTTGGTTTCTTAGTATCGGCCAAAGTGCCCGGTTTGTAGTAGTTGCATAATATGTTT-3’
rs2289669 deletion
Cas9 sgRNA spacer sequences 5’-GTGCTAAGCATCGTAACCTG-3’
5’-GAGTTCCCGGCTAGACAAAG-3’
rs8065082 deletion
Cas9 sgRNA spacer sequences 5’-ACCAAGAGGATTCTTATCAC-3’
5’-TTAGTATCGGCCAAAGTGCC-3’
5’-TTAGTATTGGCCAAAGTGCC-3’