Table 1.
Comparing pair | KEGG gene set name | Gene set size | NES | P value | FDR |
---|---|---|---|---|---|
Cluster 2 vs. rest | Glycolysis gluconeogenesis | 13 | 4.23 | 0 | 0 |
Pathogenic Escherichia coli infection | 14 | 3.63 | 0 | 0 | |
Alzheimer’s disease | 20 | 3.97 | 0 | 0 | |
Tight junction | 16 | 3.03 | 0.004 | 0.0063 | |
Cluster 3 vs. rest | Oocyte meiosis | 15 | 3.75 | 0 | 0 |
Pathogenic Escherichia coli infection | 14 | 3.48 | 0.001 | 0.0315 | |
Cell cycle | 20 | 3.13 | 0.002 | 0.042 | |
Ubiquitin-mediated proteolysis | 12 | 3.29 | 0.005 | 0.0787 | |
Cluster 4 vs. rest | Spliceosome | 13 | 3.84 | 0 | 0 |
Viral myocarditis | 25 | 3.23 | 0.002 | 0.042 | |
Cluster 5 vs. rest | Alzheimer’s disease | 20 | 3.08 | 0 | 0 |
Antigen processing and presentation | 30 | 2.51 | 0.003 | 0.0472 | |
MAPK signaling pathway | 45 | 2.91 | 0 | 0 | |
Glycolysis gluconeogenesis | 13 | 2.49 | 0.043 | 0.198 | |
Spliceosome | 13 | 2.99 | 0.004 | 0.0504 |
Note: GSEA, gene set enrichment analysis; UMAP, uniform manifold approximation and projection; KEGG, Kyoto Encyclopedia of Genes and Genomes; NES, normalized enrichment score; FDR, false detection rate.