Antibodies |
|
chicken anti-GFP |
Abcam plc. |
RRID: AB_300798
|
mouse IgG1 anti-3A10 |
DSHB |
RRID: AB_531874
|
rabbit anti-Neurofascin |
Abcam plc. |
RRID: AB_2905463
|
goat anti-mouse IgG, Alexa Fluor 633 |
Thermo Fisher |
RRID: AB_2535719
|
goat anti-rabbit IgG, Alexa Fluor 555 |
Thermo Fisher |
RRID: AB_141784
|
goat anti-chicken IgY, Alexa Fluor 488 |
Thermo Fisher |
RRID: AB_142924
|
|
Experimental models: Organisms/strains |
|
Tg(mbp:memCerulean)tum101Tg
|
Auer et al. (2018) |
ZFIN: ZDB-ALT-180712-3 |
Tg(mbp:KillerRed)tum103Tg
|
Auer et al. (2018) |
ZFIN: ZDB-ALT-180712-5 |
Tg(mbp:tagRFPt-CAAX)tum102Tg
|
Auer et al. (2018) |
ZFIN: ZDB-ALT-180712-4 |
Tg(cntn1b(3kb):KalTA4) |
This paper |
N/A |
Tg(olig1:mScarlet-CAAX) |
This paper |
N/A |
CRISPR-NfascaΔ28
|
This paper |
N/A |
|
Oligonucleotides |
|
For all oligonucleotides used, see Table S1
|
this paper |
N/A |
|
Recombinant DNA |
|
p5E_cntn1b(3kb) |
this paper |
N/A |
pME_EYFPnostop_NaV-II-III |
this paper |
N/A |
pME_sigpepEYFP_cntn1a |
this paper |
N/A |
p5E_cntn1b(5kb) |
Czopka et al. (2013) |
N/A |
pME_KalTA4GI |
Almeida and Lyons (2015) |
N/A |
p5E_UAS(10x) |
Kwan et al. (2007) |
N/A |
p3E_pA |
Kwan et al. (2007) |
N/A |
pDestTol2_pA |
Kwan et al. (2007) |
N/A |
pME_tagCFP |
Auer et al. (2018) |
N/A |
pTol2_cntn1b(5kb):Nfasca-EYFP |
Auer et al. (2018) |
N/A |
pTol2_cntn1b(5kb):EYFP-cntn1a |
this paper |
N/A |
pTol2_cntn1b(5kb):EYFP-NaV-II-III |
this paper |
N/A |
pTol2_UAS(10x):EYFP-cntn1a |
this paper |
N/A |
pTol2_cntn1b(5kb):tagCFP |
this paper |
N/A |
pTol2_cntn1b(5kb):mCherry |
Czopka et al. (2013) |
N/A |
|
Software and algorithms |
|
Fiji |
http://fiji.sc/ |
RRID: SCR_002285
|
Imaris |
Bitplane |
RRID: SCR_007370
|
Imaris FilamentTracer |
Bitplane |
RRID: SCR_007366
|
Huygens Essential |
Scientific Volume Imaging |
RRID: SCR_014237
|
Graphpad Prism 8 |
Graphpad Software |
RRID: SCR_015807
|
Code for simulation of cluster-node correlation |
This paper |
ZENODO DOI: https://doi.org/10.5281/zenodo.5846391. |