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Inclusion of HA L216 allows for a greater diversification at the whole genome level. To assess diversity at the genome level, π was calculated. Each dot shows the mean π calculated using 1 dpi and 3 dpi for the inoculated quails representing the time point at which the naïve quails were introduced—2dpi. For the contact quails, dots represent the π calculation at 1 dpc. Central line in box plots shown the median.
