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. 2022 Feb 10;12:803512. doi: 10.3389/fmicb.2021.803512

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Copyright © 2022 Han, Zhang, Qiao, Zhao, Qiao, Huang and Zhang.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Overview of m⁶A methylation profiles in pear. (A) Percentage of total m⁶A peaks located throughout the regions of mRNA transcript. (B) Proportions of different m⁶A peak numbers in m⁶A-modified transcripts. Error bars represent the SD of three biological repeats. (C) Two examples of m⁶A-modified transcripts each containing two peaks at start codon, stop codon, and CDS (coding sequence). (D) Sequence motif identified by MEME. (E) The number of gene pairs derived from five duplication types in pear. (F) Comparison of ratios of m⁶A genes and non-m⁶A genes in SGs and DGs. (G) Comparison of ratios of m⁶A genes and non-m⁶A genes in five duplication S types. (H) K_a/K_s ratio of non-m⁶A gene pairs (blue box), single gene pairs (orange box), and both-m⁶A gene pairs (red box) in WGD. (I) The percentages of gene pairs showing K_a/K_s> 1 in WGD. (J) Expression divergence among duplicate genes derived from non-m⁶A, single-m⁶A, and both-m⁶A in WGD.